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Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae)
Macdunnoughia hybrida is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of M. hybrida. This mitogenome was 15,382 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), an...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284135/ https://www.ncbi.nlm.nih.gov/pubmed/34345683 http://dx.doi.org/10.1080/23802359.2021.1945972 |
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author | Zhang, Yuanchen Xue, Shuang |
author_facet | Zhang, Yuanchen Xue, Shuang |
author_sort | Zhang, Yuanchen |
collection | PubMed |
description | Macdunnoughia hybrida is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of M. hybrida. This mitogenome was 15,382 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and two ribosomal RNA unit genes (rRNAs). Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox1, cox2 and nad4 end with the incomplete codon T−−. The whole mitogenome exhibited heavy AT nucleotide bias (80.7%). Gene order was conserved and identical to most other previously sequenced Noctuidae. Phylogenetic analysis positioned M. hybrida in a well-supported clade with Diachrysia nadeja and three Ctenoplusia species. The relationships (Catocalinae + (Plusiinae + (Acronictinae + (Heliothinae + (Amphipyrinae + (Hadeninae + Noctuinae)))))) were supported within Noctuidae. |
format | Online Article Text |
id | pubmed-8284135 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-82841352021-08-02 Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae) Zhang, Yuanchen Xue, Shuang Mitochondrial DNA B Resour Mitogenome Announcement Macdunnoughia hybrida is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of M. hybrida. This mitogenome was 15,382 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and two ribosomal RNA unit genes (rRNAs). Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox1, cox2 and nad4 end with the incomplete codon T−−. The whole mitogenome exhibited heavy AT nucleotide bias (80.7%). Gene order was conserved and identical to most other previously sequenced Noctuidae. Phylogenetic analysis positioned M. hybrida in a well-supported clade with Diachrysia nadeja and three Ctenoplusia species. The relationships (Catocalinae + (Plusiinae + (Acronictinae + (Heliothinae + (Amphipyrinae + (Hadeninae + Noctuinae)))))) were supported within Noctuidae. Taylor & Francis 2021-07-14 /pmc/articles/PMC8284135/ /pubmed/34345683 http://dx.doi.org/10.1080/23802359.2021.1945972 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Yuanchen Xue, Shuang Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae) |
title | Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae) |
title_full | Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae) |
title_fullStr | Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae) |
title_full_unstemmed | Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae) |
title_short | Characterization and phylogenetic analysis of the mitochondrial genome of Macdunnoughia hybrida (Lepidoptera: Noctuidae: Plusiinae) |
title_sort | characterization and phylogenetic analysis of the mitochondrial genome of macdunnoughia hybrida (lepidoptera: noctuidae: plusiinae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284135/ https://www.ncbi.nlm.nih.gov/pubmed/34345683 http://dx.doi.org/10.1080/23802359.2021.1945972 |
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