The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China

Sauvagesia rhodoleuca is an endangered and national key protected species of China, with limited natural distribution in Guangdong and Guangxi, Southern China. Here we reported the first complete chloroplast genome of S. rhodoleuca using genome skimming approach. The chloroplast genome is 157,300 bp...

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Autores principales: Xie, Xiao, Huang, Jiashuang, Zhang, Yonghua, Zhu, Shanshan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284140/
https://www.ncbi.nlm.nih.gov/pubmed/34345707
http://dx.doi.org/10.1080/23802359.2021.1951141
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author Xie, Xiao
Huang, Jiashuang
Zhang, Yonghua
Zhu, Shanshan
author_facet Xie, Xiao
Huang, Jiashuang
Zhang, Yonghua
Zhu, Shanshan
author_sort Xie, Xiao
collection PubMed
description Sauvagesia rhodoleuca is an endangered and national key protected species of China, with limited natural distribution in Guangdong and Guangxi, Southern China. Here we reported the first complete chloroplast genome of S. rhodoleuca using genome skimming approach. The chloroplast genome is 157,300 bp in length, with a large single-copy region (LSC) of 86,021 bp and a small single-copy region (SSC) of 18,137 bp separated by a pair of inverted repeats (IRs) of 26,571 bp. It encodes 112 unique genes, including 80 protein-coding genes, 28 transfer RNA genes, and four ribosomal RNA genes. Phylogenetic analysis results strongly supported that S. rhodoleuca was closely related to Medusagyne oppositifolia.
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spelling pubmed-82841402021-08-02 The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China Xie, Xiao Huang, Jiashuang Zhang, Yonghua Zhu, Shanshan Mitochondrial DNA B Resour Mitogenome Announcement Sauvagesia rhodoleuca is an endangered and national key protected species of China, with limited natural distribution in Guangdong and Guangxi, Southern China. Here we reported the first complete chloroplast genome of S. rhodoleuca using genome skimming approach. The chloroplast genome is 157,300 bp in length, with a large single-copy region (LSC) of 86,021 bp and a small single-copy region (SSC) of 18,137 bp separated by a pair of inverted repeats (IRs) of 26,571 bp. It encodes 112 unique genes, including 80 protein-coding genes, 28 transfer RNA genes, and four ribosomal RNA genes. Phylogenetic analysis results strongly supported that S. rhodoleuca was closely related to Medusagyne oppositifolia. Taylor & Francis 2021-07-15 /pmc/articles/PMC8284140/ /pubmed/34345707 http://dx.doi.org/10.1080/23802359.2021.1951141 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Xiao
Huang, Jiashuang
Zhang, Yonghua
Zhu, Shanshan
The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
title The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
title_full The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
title_fullStr The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
title_full_unstemmed The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
title_short The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
title_sort complete chloroplast genome of sauvagesia rhodoleuca, an endangered species endemic to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284140/
https://www.ncbi.nlm.nih.gov/pubmed/34345707
http://dx.doi.org/10.1080/23802359.2021.1951141
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