The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships

The chloroplast (cp) is an essential organelle in higher plants. The genes of the plastome are well suited to infer phylogenetic relationships among taxa. In this study, we report the assembly of the cp genome of Artocarpus altilis and its phylogeny among species from Moraceae family. The cp genome...

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Autores principales: de Souza, Ueric José Borges, dos Santos, Raíssa Nunes, de Araújo Filho, Renisson Neponuceno, dos Santos, Gil Rodrigues, Almeida Sarmento, Renato, De Bellis, Fabien, Campos, Fabrício Souza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284141/
https://www.ncbi.nlm.nih.gov/pubmed/34345682
http://dx.doi.org/10.1080/23802359.2021.1945504
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author de Souza, Ueric José Borges
dos Santos, Raíssa Nunes
de Araújo Filho, Renisson Neponuceno
dos Santos, Gil Rodrigues
Almeida Sarmento, Renato
De Bellis, Fabien
Campos, Fabrício Souza
author_facet de Souza, Ueric José Borges
dos Santos, Raíssa Nunes
de Araújo Filho, Renisson Neponuceno
dos Santos, Gil Rodrigues
Almeida Sarmento, Renato
De Bellis, Fabien
Campos, Fabrício Souza
author_sort de Souza, Ueric José Borges
collection PubMed
description The chloroplast (cp) is an essential organelle in higher plants. The genes of the plastome are well suited to infer phylogenetic relationships among taxa. In this study, we report the assembly of the cp genome of Artocarpus altilis and its phylogeny among species from Moraceae family. The cp genome of A. altilis was 160,822 base pair (bp) in length, comprising one large single-copy region of 88,692 bp, one small single-copy region of 19,290 bp, and a pair of inverted repeat regions (IRs) of 26,420 bp. A total of 113 different genes were predicted, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis of 19 species belonging to the Moraceae family confirmed the phylogenetic proximity of the genus Artocarpus and Morus and the genetic similarity of A. camansi and A. altilis.
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spelling pubmed-82841412021-08-02 The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships de Souza, Ueric José Borges dos Santos, Raíssa Nunes de Araújo Filho, Renisson Neponuceno dos Santos, Gil Rodrigues Almeida Sarmento, Renato De Bellis, Fabien Campos, Fabrício Souza Mitochondrial DNA B Resour Mitogenome Announcement The chloroplast (cp) is an essential organelle in higher plants. The genes of the plastome are well suited to infer phylogenetic relationships among taxa. In this study, we report the assembly of the cp genome of Artocarpus altilis and its phylogeny among species from Moraceae family. The cp genome of A. altilis was 160,822 base pair (bp) in length, comprising one large single-copy region of 88,692 bp, one small single-copy region of 19,290 bp, and a pair of inverted repeat regions (IRs) of 26,420 bp. A total of 113 different genes were predicted, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis of 19 species belonging to the Moraceae family confirmed the phylogenetic proximity of the genus Artocarpus and Morus and the genetic similarity of A. camansi and A. altilis. Taylor & Francis 2021-07-14 /pmc/articles/PMC8284141/ /pubmed/34345682 http://dx.doi.org/10.1080/23802359.2021.1945504 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
de Souza, Ueric José Borges
dos Santos, Raíssa Nunes
de Araújo Filho, Renisson Neponuceno
dos Santos, Gil Rodrigues
Almeida Sarmento, Renato
De Bellis, Fabien
Campos, Fabrício Souza
The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships
title The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships
title_full The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships
title_fullStr The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships
title_full_unstemmed The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships
title_short The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships
title_sort complete chloroplast genome of artocarpus altilis (moraceae) and phylogenetic relationships
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284141/
https://www.ncbi.nlm.nih.gov/pubmed/34345682
http://dx.doi.org/10.1080/23802359.2021.1945504
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