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Molecular record for the first authentication of Isaria cicadae from Vietnam
The entomopathogenic fungus T011, parasitizing on nymph of Cicada, collected in the coffee garden in Dak Lak Province, Vietnam, was preliminarily morphologically identified as Isaria cicadae, belonged to order Hypocreales and family Clavicipitaceae. To ensure the authenticity of T011, phylogenetic a...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
De Gruyter
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284333/ https://www.ncbi.nlm.nih.gov/pubmed/34307886 http://dx.doi.org/10.1515/biol-2021-0074 |
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author | Lao, Thuan Duc Van Trinh, Hanh Vuong, Loi Tien Vu, Luyen Huyen Le, Thuy Ai Dinh, Hiep Minh Truong, Nguyen Binh |
author_facet | Lao, Thuan Duc Van Trinh, Hanh Vuong, Loi Tien Vu, Luyen Huyen Le, Thuy Ai Dinh, Hiep Minh Truong, Nguyen Binh |
author_sort | Lao, Thuan Duc |
collection | PubMed |
description | The entomopathogenic fungus T011, parasitizing on nymph of Cicada, collected in the coffee garden in Dak Lak Province, Vietnam, was preliminarily morphologically identified as Isaria cicadae, belonged to order Hypocreales and family Clavicipitaceae. To ensure the authenticity of T011, phylogenetic analysis of the concatenated set of multiple genes including ITS, nrLSU, nrSSU, Rpb1, and Tef1 was applied to support the identification. Genomic DNA was isolated from dried sample T011. The PCR assay sequencing was applied to amplify ITS, nrLSU, nrSSU, Rpb1, and Tef1 gene. For phylogenetic analysis, the concatenated data of both target gens were constructed with MEGAX with a 1,000 replicate bootstrap based on the neighbor-joining, maximum likelihood, maximum parsimony method. As the result, the concatenated data containing 62 sequences belonged to order Hypocreales, families Clavicipitaceae, and 2 outgroup sequences belonged to order Hypocreales, genus Verticillium. The phylogenetic analysis results indicated that T011 was accepted at subclade Cordyceps and significantly formed the monophyletic group with referent Cordyceps cicadae (Telemorph of Isaria cicadae) with high bootstrap value. The phylogenetically analyzed result was strongly supported by our morphological analysis described as the Isaria cicadae. In summary, phylogenetic analyses based on the concatenated dataset were successfully applied to strengthen the identification of T011 as Isaria cicadae. |
format | Online Article Text |
id | pubmed-8284333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | De Gruyter |
record_format | MEDLINE/PubMed |
spelling | pubmed-82843332021-07-23 Molecular record for the first authentication of Isaria cicadae from Vietnam Lao, Thuan Duc Van Trinh, Hanh Vuong, Loi Tien Vu, Luyen Huyen Le, Thuy Ai Dinh, Hiep Minh Truong, Nguyen Binh Open Life Sci Research Article The entomopathogenic fungus T011, parasitizing on nymph of Cicada, collected in the coffee garden in Dak Lak Province, Vietnam, was preliminarily morphologically identified as Isaria cicadae, belonged to order Hypocreales and family Clavicipitaceae. To ensure the authenticity of T011, phylogenetic analysis of the concatenated set of multiple genes including ITS, nrLSU, nrSSU, Rpb1, and Tef1 was applied to support the identification. Genomic DNA was isolated from dried sample T011. The PCR assay sequencing was applied to amplify ITS, nrLSU, nrSSU, Rpb1, and Tef1 gene. For phylogenetic analysis, the concatenated data of both target gens were constructed with MEGAX with a 1,000 replicate bootstrap based on the neighbor-joining, maximum likelihood, maximum parsimony method. As the result, the concatenated data containing 62 sequences belonged to order Hypocreales, families Clavicipitaceae, and 2 outgroup sequences belonged to order Hypocreales, genus Verticillium. The phylogenetic analysis results indicated that T011 was accepted at subclade Cordyceps and significantly formed the monophyletic group with referent Cordyceps cicadae (Telemorph of Isaria cicadae) with high bootstrap value. The phylogenetically analyzed result was strongly supported by our morphological analysis described as the Isaria cicadae. In summary, phylogenetic analyses based on the concatenated dataset were successfully applied to strengthen the identification of T011 as Isaria cicadae. De Gruyter 2021-07-15 /pmc/articles/PMC8284333/ /pubmed/34307886 http://dx.doi.org/10.1515/biol-2021-0074 Text en © 2021 Thuan Duc Lao et al., published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. |
spellingShingle | Research Article Lao, Thuan Duc Van Trinh, Hanh Vuong, Loi Tien Vu, Luyen Huyen Le, Thuy Ai Dinh, Hiep Minh Truong, Nguyen Binh Molecular record for the first authentication of Isaria cicadae from Vietnam |
title | Molecular record for the first authentication of Isaria cicadae from Vietnam |
title_full | Molecular record for the first authentication of Isaria cicadae from Vietnam |
title_fullStr | Molecular record for the first authentication of Isaria cicadae from Vietnam |
title_full_unstemmed | Molecular record for the first authentication of Isaria cicadae from Vietnam |
title_short | Molecular record for the first authentication of Isaria cicadae from Vietnam |
title_sort | molecular record for the first authentication of isaria cicadae from vietnam |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284333/ https://www.ncbi.nlm.nih.gov/pubmed/34307886 http://dx.doi.org/10.1515/biol-2021-0074 |
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