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Using a modified double deep image prior for crosstalk mitigation in multislice ptychography
Multislice ptychography is a high-resolution microscopy technique used to image multiple separate axial planes using a single illumination direction. However, multislice ptychography reconstructions are often degraded by crosstalk, where some features on one plane erroneously contribute to the recon...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284408/ https://www.ncbi.nlm.nih.gov/pubmed/34212877 http://dx.doi.org/10.1107/S1600577521003507 |
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author | Du, Ming Huang, Xiaojing Jacobsen, Chris |
author_facet | Du, Ming Huang, Xiaojing Jacobsen, Chris |
author_sort | Du, Ming |
collection | PubMed |
description | Multislice ptychography is a high-resolution microscopy technique used to image multiple separate axial planes using a single illumination direction. However, multislice ptychography reconstructions are often degraded by crosstalk, where some features on one plane erroneously contribute to the reconstructed image of another plane. Here, the use of a modified ‘double deep image prior’ (DDIP) architecture is demonstrated in mitigating crosstalk artifacts in multislice ptychography. Utilizing the tendency of generative neural networks to produce natural images, a modified DDIP method yielded good results on experimental data. For one of the datasets, it is shown that using DDIP could remove the need of using additional experimental data, such as from X-ray fluorescence, to suppress the crosstalk. This method may help X-ray multislice ptychography work for more general experimental scenarios. |
format | Online Article Text |
id | pubmed-8284408 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-82844082021-08-02 Using a modified double deep image prior for crosstalk mitigation in multislice ptychography Du, Ming Huang, Xiaojing Jacobsen, Chris J Synchrotron Radiat Research Papers Multislice ptychography is a high-resolution microscopy technique used to image multiple separate axial planes using a single illumination direction. However, multislice ptychography reconstructions are often degraded by crosstalk, where some features on one plane erroneously contribute to the reconstructed image of another plane. Here, the use of a modified ‘double deep image prior’ (DDIP) architecture is demonstrated in mitigating crosstalk artifacts in multislice ptychography. Utilizing the tendency of generative neural networks to produce natural images, a modified DDIP method yielded good results on experimental data. For one of the datasets, it is shown that using DDIP could remove the need of using additional experimental data, such as from X-ray fluorescence, to suppress the crosstalk. This method may help X-ray multislice ptychography work for more general experimental scenarios. International Union of Crystallography 2021-05-19 /pmc/articles/PMC8284408/ /pubmed/34212877 http://dx.doi.org/10.1107/S1600577521003507 Text en © Du, Huang and Jacobsen 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Du, Ming Huang, Xiaojing Jacobsen, Chris Using a modified double deep image prior for crosstalk mitigation in multislice ptychography |
title | Using a modified double deep image prior for crosstalk mitigation in multislice ptychography |
title_full | Using a modified double deep image prior for crosstalk mitigation in multislice ptychography |
title_fullStr | Using a modified double deep image prior for crosstalk mitigation in multislice ptychography |
title_full_unstemmed | Using a modified double deep image prior for crosstalk mitigation in multislice ptychography |
title_short | Using a modified double deep image prior for crosstalk mitigation in multislice ptychography |
title_sort | using a modified double deep image prior for crosstalk mitigation in multislice ptychography |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284408/ https://www.ncbi.nlm.nih.gov/pubmed/34212877 http://dx.doi.org/10.1107/S1600577521003507 |
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