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BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis
BCL7B plays a potential role in the progression of various cancers, while its role in sarcomas is unknown. We aimed to evaluate BCL7B's diagnostic and prognostic value, and potential BCL7B-related mechanisms in sarcomas based on The Cancer Genome Atlas (TCGA) database. We collected patients wit...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284715/ https://www.ncbi.nlm.nih.gov/pubmed/34260555 http://dx.doi.org/10.1097/MD.0000000000026632 |
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author | Yang, Dinglong Gu, Xiaodong Li, Chunjiang Shi, Junjun Chen, Yujing Dong, Mingjie Zhang, Zhiqiang |
author_facet | Yang, Dinglong Gu, Xiaodong Li, Chunjiang Shi, Junjun Chen, Yujing Dong, Mingjie Zhang, Zhiqiang |
author_sort | Yang, Dinglong |
collection | PubMed |
description | BCL7B plays a potential role in the progression of various cancers, while its role in sarcomas is unknown. We aimed to evaluate BCL7B's diagnostic and prognostic value, and potential BCL7B-related mechanisms in sarcomas based on The Cancer Genome Atlas (TCGA) database. We collected patients with sarcoma from TCGA. Wilcoxon rank sum test was used to compare the expression of BCL7B in sarcoma samples with different clinical-pathologic features. Univariate Cox regression analysis and multivariate Cox regression analysis were used to evaluate prognosis factors for sarcoma. Gene set enrichment analysis (GSEA) was conducted to elucidate the significant functions and pathways associated with BCL7B. BCL7B was a potential biomarker for distinguishing normal and tumor tissues with the analysis of ROC curve (AUC = 0.588). Low BCL7B expression was significantly correlated with tumor multifocal (OR = 0.39 for yes vs no), larger residual tumor (OR = 0.40 for R1,R2 vs RO), male gender (OR = 0.48 for male vs female) and White race (OR = 0.29 for White vs Asian, Black or African American). High BCL7B expression was correlated with leiomyosarcoma histological type (OR = 6.08 for leiomyosarcoma vs dedifferentiated liposarcoma, pleomorphic sarcoma). Univariate and multivariate Cox regression analysis showed that low BCL7B expression was independently associated with poor overall survival (P = .008). GSEA showed that GPCR (G protein-coupled receptors) ligand binding, secreted factors, class A1 rhodopsin-like receptors, extracellular matrix organization, core matrisome, Fc epsilon receptor I mediated NF-κB activation, and WNT signaling pathway were differentially enriched in BCL7B low expression phenotype (|NES| > 1, adjusted P value <.05, and FDR value <0.25). BCL7B may play an important role in sarcoma progression and may be a potential biomarker for prognosis and diagnosis in sarcomas. |
format | Online Article Text |
id | pubmed-8284715 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-82847152021-07-19 BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis Yang, Dinglong Gu, Xiaodong Li, Chunjiang Shi, Junjun Chen, Yujing Dong, Mingjie Zhang, Zhiqiang Medicine (Baltimore) 5700 BCL7B plays a potential role in the progression of various cancers, while its role in sarcomas is unknown. We aimed to evaluate BCL7B's diagnostic and prognostic value, and potential BCL7B-related mechanisms in sarcomas based on The Cancer Genome Atlas (TCGA) database. We collected patients with sarcoma from TCGA. Wilcoxon rank sum test was used to compare the expression of BCL7B in sarcoma samples with different clinical-pathologic features. Univariate Cox regression analysis and multivariate Cox regression analysis were used to evaluate prognosis factors for sarcoma. Gene set enrichment analysis (GSEA) was conducted to elucidate the significant functions and pathways associated with BCL7B. BCL7B was a potential biomarker for distinguishing normal and tumor tissues with the analysis of ROC curve (AUC = 0.588). Low BCL7B expression was significantly correlated with tumor multifocal (OR = 0.39 for yes vs no), larger residual tumor (OR = 0.40 for R1,R2 vs RO), male gender (OR = 0.48 for male vs female) and White race (OR = 0.29 for White vs Asian, Black or African American). High BCL7B expression was correlated with leiomyosarcoma histological type (OR = 6.08 for leiomyosarcoma vs dedifferentiated liposarcoma, pleomorphic sarcoma). Univariate and multivariate Cox regression analysis showed that low BCL7B expression was independently associated with poor overall survival (P = .008). GSEA showed that GPCR (G protein-coupled receptors) ligand binding, secreted factors, class A1 rhodopsin-like receptors, extracellular matrix organization, core matrisome, Fc epsilon receptor I mediated NF-κB activation, and WNT signaling pathway were differentially enriched in BCL7B low expression phenotype (|NES| > 1, adjusted P value <.05, and FDR value <0.25). BCL7B may play an important role in sarcoma progression and may be a potential biomarker for prognosis and diagnosis in sarcomas. Lippincott Williams & Wilkins 2021-07-16 /pmc/articles/PMC8284715/ /pubmed/34260555 http://dx.doi.org/10.1097/MD.0000000000026632 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) |
spellingShingle | 5700 Yang, Dinglong Gu, Xiaodong Li, Chunjiang Shi, Junjun Chen, Yujing Dong, Mingjie Zhang, Zhiqiang BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis |
title | BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis |
title_full | BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis |
title_fullStr | BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis |
title_full_unstemmed | BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis |
title_short | BCL7B is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis |
title_sort | bcl7b is a potential novel diagnosis and prognosis biomarker for sarcomas using bioinformatics analysis |
topic | 5700 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284715/ https://www.ncbi.nlm.nih.gov/pubmed/34260555 http://dx.doi.org/10.1097/MD.0000000000026632 |
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