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An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study
BACKGROUND: In a pandemic situation (e.g., COVID-19), the most important issue is to select patients at risk of high mortality at an early stage and to provide appropriate treatments. However, a few studies applied the model to predict in-hospital mortality using routine blood samples at the time of...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284724/ https://www.ncbi.nlm.nih.gov/pubmed/34260529 http://dx.doi.org/10.1097/MD.0000000000026532 |
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author | Lin, Ju-Kuo Chien, Tsair-Wei Wang, Lin-Yen Chou, Willy |
author_facet | Lin, Ju-Kuo Chien, Tsair-Wei Wang, Lin-Yen Chou, Willy |
author_sort | Lin, Ju-Kuo |
collection | PubMed |
description | BACKGROUND: In a pandemic situation (e.g., COVID-19), the most important issue is to select patients at risk of high mortality at an early stage and to provide appropriate treatments. However, a few studies applied the model to predict in-hospital mortality using routine blood samples at the time of hospital admission. This study aimed to develop an app, name predict the mortality of COVID-19 patients (PMCP) app, to predict the mortality of COVID-19 patients at hospital-admission time. METHODS: We downloaded patient records from 2 studies, including 361 COVID-19 patients in Wuhan, China, and 106 COVID-19 patients in 3 Korean medical institutions. A total of 30 feature variables were retrieved, consisting of 28 blood biomarkers and 2 demographic variables (i.e., age and gender) of patients. Two models, namely, artificial neural network (ANN) and convolutional neural network (CNN), were compared with each other across 2 scenarios using: 1. raw laboratory versus normalized data and 2. training vs testing datasets (n = 361 and n = 106/361≅30%) to verify the model performance (e.g., sensitivity [SENS], specificity [SPEC], and area under the receiver operating characteristic curve [AUC]). An app for predicting the mortality of COVID-19 patients was developed using the model's estimated parameters for the prediction and classification of PMCP at an earlier stage. Feature variables and prediction results were visualized using the forest plot and category probability curves shown on Google Maps. RESULTS: We observed that: 1. the normalized dataset gains a relatively higher AUC(>0.9) when compared to that(<0.9) in the raw-laboratory dataset based on training data, 2. the normalized dataset in ANN yielded a high AUC of 0.96 that that(=0.91) in CNN based on testing data, and 3. a ready and available app, where anyone can access the model to predict mortality, for PMCP was developed in this study. CONCLUSIONS: Our new PMCP app with ANN model accurately predicts the mortality probability for COVID-19 patients. It is publicly available and aims to help health care providers fight COVID-19 and improve patients’ classifications against treatment risk. |
format | Online Article Text |
id | pubmed-8284724 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-82847242021-07-19 An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study Lin, Ju-Kuo Chien, Tsair-Wei Wang, Lin-Yen Chou, Willy Medicine (Baltimore) 4400 BACKGROUND: In a pandemic situation (e.g., COVID-19), the most important issue is to select patients at risk of high mortality at an early stage and to provide appropriate treatments. However, a few studies applied the model to predict in-hospital mortality using routine blood samples at the time of hospital admission. This study aimed to develop an app, name predict the mortality of COVID-19 patients (PMCP) app, to predict the mortality of COVID-19 patients at hospital-admission time. METHODS: We downloaded patient records from 2 studies, including 361 COVID-19 patients in Wuhan, China, and 106 COVID-19 patients in 3 Korean medical institutions. A total of 30 feature variables were retrieved, consisting of 28 blood biomarkers and 2 demographic variables (i.e., age and gender) of patients. Two models, namely, artificial neural network (ANN) and convolutional neural network (CNN), were compared with each other across 2 scenarios using: 1. raw laboratory versus normalized data and 2. training vs testing datasets (n = 361 and n = 106/361≅30%) to verify the model performance (e.g., sensitivity [SENS], specificity [SPEC], and area under the receiver operating characteristic curve [AUC]). An app for predicting the mortality of COVID-19 patients was developed using the model's estimated parameters for the prediction and classification of PMCP at an earlier stage. Feature variables and prediction results were visualized using the forest plot and category probability curves shown on Google Maps. RESULTS: We observed that: 1. the normalized dataset gains a relatively higher AUC(>0.9) when compared to that(<0.9) in the raw-laboratory dataset based on training data, 2. the normalized dataset in ANN yielded a high AUC of 0.96 that that(=0.91) in CNN based on testing data, and 3. a ready and available app, where anyone can access the model to predict mortality, for PMCP was developed in this study. CONCLUSIONS: Our new PMCP app with ANN model accurately predicts the mortality probability for COVID-19 patients. It is publicly available and aims to help health care providers fight COVID-19 and improve patients’ classifications against treatment risk. Lippincott Williams & Wilkins 2021-07-16 /pmc/articles/PMC8284724/ /pubmed/34260529 http://dx.doi.org/10.1097/MD.0000000000026532 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) This article is made available via the PMC Open Access Subset for unrestricted re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the COVID-19 pandemic or until permissions are revoked in writing. Upon expiration of these permissions, PMC is granted a perpetual license to make this article available via PMC and Europe PMC, consistent with existing copyright protections. |
spellingShingle | 4400 Lin, Ju-Kuo Chien, Tsair-Wei Wang, Lin-Yen Chou, Willy An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study |
title | An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study |
title_full | An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study |
title_fullStr | An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study |
title_full_unstemmed | An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study |
title_short | An artificial neural network model to predict the mortality of COVID-19 patients using routine blood samples at the time of hospital admission: Development and validation study |
title_sort | artificial neural network model to predict the mortality of covid-19 patients using routine blood samples at the time of hospital admission: development and validation study |
topic | 4400 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284724/ https://www.ncbi.nlm.nih.gov/pubmed/34260529 http://dx.doi.org/10.1097/MD.0000000000026532 |
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