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Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes
BACKGROUND: Ovarian cancer is one of the lethal gynecological diseases in women. However, using tumor microenvironment related genes to identify prognostic signature of ovarian cancer has not been discussed in detail. METHODS: The mRNA profiles of 386 ovarian cancer patients were retrieved from The...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284754/ https://www.ncbi.nlm.nih.gov/pubmed/34260536 http://dx.doi.org/10.1097/MD.0000000000026574 |
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author | Nie, Xiazi Song, Lina Li, Xiaohua Wang, Yirong Qu, Bo |
author_facet | Nie, Xiazi Song, Lina Li, Xiaohua Wang, Yirong Qu, Bo |
author_sort | Nie, Xiazi |
collection | PubMed |
description | BACKGROUND: Ovarian cancer is one of the lethal gynecological diseases in women. However, using tumor microenvironment related genes to identify prognostic signature of ovarian cancer has not been discussed in detail. METHODS: The mRNA profiles of 386 ovarian cancer patients were retrieved from The Cancer Genome Atlas. Univariate Cox regression and LASSO Cox regression analyses were performed and 14 optimized prognostic genes related to tumor microenvironment were identified. RESULTS: The multivariate Cox hazards regression showed risk score was an independent prognostic signature for ovarian cancer. Nomogram model could reliably predict the patients’ survival. Furthermore, M1 macrophages, M2 macrophages, and follicular helper T cells, differentially expressed between the high- and low-risk groups, were found to be associated with the risk score. CONCLUSION: CTL-associated antigen 4 (CTLA4) and indoleamine 2,3-Dioxygenase 1 (IDO1), which were previously shown to be important immune checkpoints, probably contribute to the immunosuppressive microenvironment aberration. This study may shed light on the prognosis of ovarian cancer. |
format | Online Article Text |
id | pubmed-8284754 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-82847542021-07-19 Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes Nie, Xiazi Song, Lina Li, Xiaohua Wang, Yirong Qu, Bo Medicine (Baltimore) 5600 BACKGROUND: Ovarian cancer is one of the lethal gynecological diseases in women. However, using tumor microenvironment related genes to identify prognostic signature of ovarian cancer has not been discussed in detail. METHODS: The mRNA profiles of 386 ovarian cancer patients were retrieved from The Cancer Genome Atlas. Univariate Cox regression and LASSO Cox regression analyses were performed and 14 optimized prognostic genes related to tumor microenvironment were identified. RESULTS: The multivariate Cox hazards regression showed risk score was an independent prognostic signature for ovarian cancer. Nomogram model could reliably predict the patients’ survival. Furthermore, M1 macrophages, M2 macrophages, and follicular helper T cells, differentially expressed between the high- and low-risk groups, were found to be associated with the risk score. CONCLUSION: CTL-associated antigen 4 (CTLA4) and indoleamine 2,3-Dioxygenase 1 (IDO1), which were previously shown to be important immune checkpoints, probably contribute to the immunosuppressive microenvironment aberration. This study may shed light on the prognosis of ovarian cancer. Lippincott Williams & Wilkins 2021-07-16 /pmc/articles/PMC8284754/ /pubmed/34260536 http://dx.doi.org/10.1097/MD.0000000000026574 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) |
spellingShingle | 5600 Nie, Xiazi Song, Lina Li, Xiaohua Wang, Yirong Qu, Bo Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes |
title | Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes |
title_full | Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes |
title_fullStr | Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes |
title_full_unstemmed | Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes |
title_short | Prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes |
title_sort | prognostic signature of ovarian cancer based on 14 tumor microenvironment-related genes |
topic | 5600 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284754/ https://www.ncbi.nlm.nih.gov/pubmed/34260536 http://dx.doi.org/10.1097/MD.0000000000026574 |
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