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Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19

The availability of the epidemiological data strongly affects the reliability of several mathematical models in tracing and forecasting COVID-19 pandemic, hampering a fair assessment of their relative performance. The marked difference between the lethality of the virus when comparing the first and...

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Autores principales: Fiscon, Giulia, Salvadore, Francesco, Guarrasi, Valerio, Garbuglia, Anna Rosa, Paci, Paola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285363/
https://www.ncbi.nlm.nih.gov/pubmed/34303266
http://dx.doi.org/10.1016/j.compbiomed.2021.104657
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author Fiscon, Giulia
Salvadore, Francesco
Guarrasi, Valerio
Garbuglia, Anna Rosa
Paci, Paola
author_facet Fiscon, Giulia
Salvadore, Francesco
Guarrasi, Valerio
Garbuglia, Anna Rosa
Paci, Paola
author_sort Fiscon, Giulia
collection PubMed
description The availability of the epidemiological data strongly affects the reliability of several mathematical models in tracing and forecasting COVID-19 pandemic, hampering a fair assessment of their relative performance. The marked difference between the lethality of the virus when comparing the first and second waves is an evident sign of the poor reliability of the data, also related to the variability over time in the number of performed swabs. During the early epidemic stage, swabs were made only to patients with severe symptoms taken to hospital or intensive care unit. Thus, asymptomatic people, not seeking medical assistance, remained undetected. Conversely, during the second wave of infection, total infectives included also a percentage of detected asymptomatic infectives, being tested due to close contacts with swab positives and thus registered by the health system. Here, we compared the outcomes of two SIR-type models (the standard SIR model and the A-SIR model that explicitly considers asymptomatic infectives) in reproducing the COVID-19 epidemic dynamic in Italy, Spain, Germany, and France during the first two infection waves, simulated separately. We found that the A-SIR model overcame the SIR model in simulating the first wave, whereas these discrepancies are reduced in simulating the second wave, when the accuracy of the epidemiological data is considerably higher. These results indicate that increasing the complexity of the model is useless and unnecessarily wasteful if not supported by an increased quality of the available data.
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spelling pubmed-82853632021-07-20 Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19 Fiscon, Giulia Salvadore, Francesco Guarrasi, Valerio Garbuglia, Anna Rosa Paci, Paola Comput Biol Med Article The availability of the epidemiological data strongly affects the reliability of several mathematical models in tracing and forecasting COVID-19 pandemic, hampering a fair assessment of their relative performance. The marked difference between the lethality of the virus when comparing the first and second waves is an evident sign of the poor reliability of the data, also related to the variability over time in the number of performed swabs. During the early epidemic stage, swabs were made only to patients with severe symptoms taken to hospital or intensive care unit. Thus, asymptomatic people, not seeking medical assistance, remained undetected. Conversely, during the second wave of infection, total infectives included also a percentage of detected asymptomatic infectives, being tested due to close contacts with swab positives and thus registered by the health system. Here, we compared the outcomes of two SIR-type models (the standard SIR model and the A-SIR model that explicitly considers asymptomatic infectives) in reproducing the COVID-19 epidemic dynamic in Italy, Spain, Germany, and France during the first two infection waves, simulated separately. We found that the A-SIR model overcame the SIR model in simulating the first wave, whereas these discrepancies are reduced in simulating the second wave, when the accuracy of the epidemiological data is considerably higher. These results indicate that increasing the complexity of the model is useless and unnecessarily wasteful if not supported by an increased quality of the available data. Elsevier Ltd. 2021-08 2021-07-17 /pmc/articles/PMC8285363/ /pubmed/34303266 http://dx.doi.org/10.1016/j.compbiomed.2021.104657 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Fiscon, Giulia
Salvadore, Francesco
Guarrasi, Valerio
Garbuglia, Anna Rosa
Paci, Paola
Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19
title Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19
title_full Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19
title_fullStr Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19
title_full_unstemmed Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19
title_short Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19
title_sort assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285363/
https://www.ncbi.nlm.nih.gov/pubmed/34303266
http://dx.doi.org/10.1016/j.compbiomed.2021.104657
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