Cargando…

Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore

Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte chemistry and applied voltage are critical for protein transport and impact, for example, capture rate (C(R)), transport mechanism (i.e., ele...

Descripción completa

Detalles Bibliográficos
Autores principales: Saharia, Jugal, Bandara, Y. M. Nuwan D. Y., Karawdeniya, Buddini I., Hammond, Cassandra, Alexandrakis, George, Kim, Min Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285365/
https://www.ncbi.nlm.nih.gov/pubmed/34354824
http://dx.doi.org/10.1039/d1ra03903b
_version_ 1783723547035697152
author Saharia, Jugal
Bandara, Y. M. Nuwan D. Y.
Karawdeniya, Buddini I.
Hammond, Cassandra
Alexandrakis, George
Kim, Min Jun
author_facet Saharia, Jugal
Bandara, Y. M. Nuwan D. Y.
Karawdeniya, Buddini I.
Hammond, Cassandra
Alexandrakis, George
Kim, Min Jun
author_sort Saharia, Jugal
collection PubMed
description Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte chemistry and applied voltage are critical for protein transport and impact, for example, capture rate (C(R)), transport mechanism (i.e., electrophoresis, electroosmosis or diffusion), and 3D conformation (e.g., chaotropic vs. kosmotropic effects). In this study, we explored these using 0.5–4 M LiCl and KCl electrolytes with holo-human serum transferrin (hSTf) protein as the model protein in both low (±50 mV) and high (±400 mV) electric field regimes. Unlike in KCl, where events were purely electrophoretic, the transport in LiCl transitioned from electrophoretic to electroosmotic with decreasing salt concentration while intermediate concentrations (i.e., 2 M and 2.5 M) were influenced by diffusion. Segregating diffusion-limited capture rate (R(diff)) into electrophoretic (R(diff,EP)) and electroosmotic (R(diff,EO)) components provided an approach to calculate the zeta-potential of hSTf (ζ(hSTf)) with the aid of C(R) and zeta potential of the nanopore surface (ζ(pore)) with (ζ(pore)–ζ(hSTf)) governing the transport mechanism. Scrutinization of the conventional excluded volume model revealed its shortcomings in capturing surface contributions and a new model was then developed to fit the translocation characteristics of proteins.
format Online
Article
Text
id pubmed-8285365
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher The Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-82853652021-08-03 Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore Saharia, Jugal Bandara, Y. M. Nuwan D. Y. Karawdeniya, Buddini I. Hammond, Cassandra Alexandrakis, George Kim, Min Jun RSC Adv Chemistry Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte chemistry and applied voltage are critical for protein transport and impact, for example, capture rate (C(R)), transport mechanism (i.e., electrophoresis, electroosmosis or diffusion), and 3D conformation (e.g., chaotropic vs. kosmotropic effects). In this study, we explored these using 0.5–4 M LiCl and KCl electrolytes with holo-human serum transferrin (hSTf) protein as the model protein in both low (±50 mV) and high (±400 mV) electric field regimes. Unlike in KCl, where events were purely electrophoretic, the transport in LiCl transitioned from electrophoretic to electroosmotic with decreasing salt concentration while intermediate concentrations (i.e., 2 M and 2.5 M) were influenced by diffusion. Segregating diffusion-limited capture rate (R(diff)) into electrophoretic (R(diff,EP)) and electroosmotic (R(diff,EO)) components provided an approach to calculate the zeta-potential of hSTf (ζ(hSTf)) with the aid of C(R) and zeta potential of the nanopore surface (ζ(pore)) with (ζ(pore)–ζ(hSTf)) governing the transport mechanism. Scrutinization of the conventional excluded volume model revealed its shortcomings in capturing surface contributions and a new model was then developed to fit the translocation characteristics of proteins. The Royal Society of Chemistry 2021-07-12 /pmc/articles/PMC8285365/ /pubmed/34354824 http://dx.doi.org/10.1039/d1ra03903b Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Saharia, Jugal
Bandara, Y. M. Nuwan D. Y.
Karawdeniya, Buddini I.
Hammond, Cassandra
Alexandrakis, George
Kim, Min Jun
Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
title Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
title_full Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
title_fullStr Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
title_full_unstemmed Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
title_short Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
title_sort modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285365/
https://www.ncbi.nlm.nih.gov/pubmed/34354824
http://dx.doi.org/10.1039/d1ra03903b
work_keys_str_mv AT sahariajugal modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore
AT bandaraymnuwandy modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore
AT karawdeniyabuddinii modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore
AT hammondcassandra modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore
AT alexandrakisgeorge modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore
AT kimminjun modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore