Cargando…
Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte chemistry and applied voltage are critical for protein transport and impact, for example, capture rate (C(R)), transport mechanism (i.e., ele...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285365/ https://www.ncbi.nlm.nih.gov/pubmed/34354824 http://dx.doi.org/10.1039/d1ra03903b |
_version_ | 1783723547035697152 |
---|---|
author | Saharia, Jugal Bandara, Y. M. Nuwan D. Y. Karawdeniya, Buddini I. Hammond, Cassandra Alexandrakis, George Kim, Min Jun |
author_facet | Saharia, Jugal Bandara, Y. M. Nuwan D. Y. Karawdeniya, Buddini I. Hammond, Cassandra Alexandrakis, George Kim, Min Jun |
author_sort | Saharia, Jugal |
collection | PubMed |
description | Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte chemistry and applied voltage are critical for protein transport and impact, for example, capture rate (C(R)), transport mechanism (i.e., electrophoresis, electroosmosis or diffusion), and 3D conformation (e.g., chaotropic vs. kosmotropic effects). In this study, we explored these using 0.5–4 M LiCl and KCl electrolytes with holo-human serum transferrin (hSTf) protein as the model protein in both low (±50 mV) and high (±400 mV) electric field regimes. Unlike in KCl, where events were purely electrophoretic, the transport in LiCl transitioned from electrophoretic to electroosmotic with decreasing salt concentration while intermediate concentrations (i.e., 2 M and 2.5 M) were influenced by diffusion. Segregating diffusion-limited capture rate (R(diff)) into electrophoretic (R(diff,EP)) and electroosmotic (R(diff,EO)) components provided an approach to calculate the zeta-potential of hSTf (ζ(hSTf)) with the aid of C(R) and zeta potential of the nanopore surface (ζ(pore)) with (ζ(pore)–ζ(hSTf)) governing the transport mechanism. Scrutinization of the conventional excluded volume model revealed its shortcomings in capturing surface contributions and a new model was then developed to fit the translocation characteristics of proteins. |
format | Online Article Text |
id | pubmed-8285365 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-82853652021-08-03 Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore Saharia, Jugal Bandara, Y. M. Nuwan D. Y. Karawdeniya, Buddini I. Hammond, Cassandra Alexandrakis, George Kim, Min Jun RSC Adv Chemistry Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte chemistry and applied voltage are critical for protein transport and impact, for example, capture rate (C(R)), transport mechanism (i.e., electrophoresis, electroosmosis or diffusion), and 3D conformation (e.g., chaotropic vs. kosmotropic effects). In this study, we explored these using 0.5–4 M LiCl and KCl electrolytes with holo-human serum transferrin (hSTf) protein as the model protein in both low (±50 mV) and high (±400 mV) electric field regimes. Unlike in KCl, where events were purely electrophoretic, the transport in LiCl transitioned from electrophoretic to electroosmotic with decreasing salt concentration while intermediate concentrations (i.e., 2 M and 2.5 M) were influenced by diffusion. Segregating diffusion-limited capture rate (R(diff)) into electrophoretic (R(diff,EP)) and electroosmotic (R(diff,EO)) components provided an approach to calculate the zeta-potential of hSTf (ζ(hSTf)) with the aid of C(R) and zeta potential of the nanopore surface (ζ(pore)) with (ζ(pore)–ζ(hSTf)) governing the transport mechanism. Scrutinization of the conventional excluded volume model revealed its shortcomings in capturing surface contributions and a new model was then developed to fit the translocation characteristics of proteins. The Royal Society of Chemistry 2021-07-12 /pmc/articles/PMC8285365/ /pubmed/34354824 http://dx.doi.org/10.1039/d1ra03903b Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Saharia, Jugal Bandara, Y. M. Nuwan D. Y. Karawdeniya, Buddini I. Hammond, Cassandra Alexandrakis, George Kim, Min Jun Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore |
title | Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore |
title_full | Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore |
title_fullStr | Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore |
title_full_unstemmed | Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore |
title_short | Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore |
title_sort | modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285365/ https://www.ncbi.nlm.nih.gov/pubmed/34354824 http://dx.doi.org/10.1039/d1ra03903b |
work_keys_str_mv | AT sahariajugal modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore AT bandaraymnuwandy modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore AT karawdeniyabuddinii modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore AT hammondcassandra modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore AT alexandrakisgeorge modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore AT kimminjun modulationofelectrophoresiselectroosmosisanddiffusionforelectricaltransportofproteinsthroughasolidstatenanopore |