Cargando…
A DICOM dataset for evaluation of medical image de-identification
We developed a DICOM dataset that can be used to evaluate the performance of de-identification algorithms. DICOM objects (a total of 1,693 CT, MRI, PET, and digital X-ray images) were selected from datasets published in the Cancer Imaging Archive (TCIA). Synthetic Protected Health Information (PHI)...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285420/ https://www.ncbi.nlm.nih.gov/pubmed/34272388 http://dx.doi.org/10.1038/s41597-021-00967-y |
_version_ | 1783723558755631104 |
---|---|
author | Rutherford, Michael Mun, Seong K. Levine, Betty Bennett, William Smith, Kirk Farmer, Phil Jarosz, Quasar Wagner, Ulrike Freyman, John Blake, Geri Tarbox, Lawrence Farahani, Keyvan Prior, Fred |
author_facet | Rutherford, Michael Mun, Seong K. Levine, Betty Bennett, William Smith, Kirk Farmer, Phil Jarosz, Quasar Wagner, Ulrike Freyman, John Blake, Geri Tarbox, Lawrence Farahani, Keyvan Prior, Fred |
author_sort | Rutherford, Michael |
collection | PubMed |
description | We developed a DICOM dataset that can be used to evaluate the performance of de-identification algorithms. DICOM objects (a total of 1,693 CT, MRI, PET, and digital X-ray images) were selected from datasets published in the Cancer Imaging Archive (TCIA). Synthetic Protected Health Information (PHI) was generated and inserted into selected DICOM Attributes to mimic typical clinical imaging exams. The DICOM Standard and TCIA curation audit logs guided the insertion of synthetic PHI into standard and non-standard DICOM data elements. A TCIA curation team tested the utility of the evaluation dataset. With this publication, the evaluation dataset (containing synthetic PHI) and de-identified evaluation dataset (the result of TCIA curation) are released on TCIA in advance of a competition, sponsored by the National Cancer Institute (NCI), for algorithmic de-identification of medical image datasets. The competition will use a much larger evaluation dataset constructed in the same manner. This paper describes the creation of the evaluation datasets and guidelines for their use. |
format | Online Article Text |
id | pubmed-8285420 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-82854202021-07-23 A DICOM dataset for evaluation of medical image de-identification Rutherford, Michael Mun, Seong K. Levine, Betty Bennett, William Smith, Kirk Farmer, Phil Jarosz, Quasar Wagner, Ulrike Freyman, John Blake, Geri Tarbox, Lawrence Farahani, Keyvan Prior, Fred Sci Data Data Descriptor We developed a DICOM dataset that can be used to evaluate the performance of de-identification algorithms. DICOM objects (a total of 1,693 CT, MRI, PET, and digital X-ray images) were selected from datasets published in the Cancer Imaging Archive (TCIA). Synthetic Protected Health Information (PHI) was generated and inserted into selected DICOM Attributes to mimic typical clinical imaging exams. The DICOM Standard and TCIA curation audit logs guided the insertion of synthetic PHI into standard and non-standard DICOM data elements. A TCIA curation team tested the utility of the evaluation dataset. With this publication, the evaluation dataset (containing synthetic PHI) and de-identified evaluation dataset (the result of TCIA curation) are released on TCIA in advance of a competition, sponsored by the National Cancer Institute (NCI), for algorithmic de-identification of medical image datasets. The competition will use a much larger evaluation dataset constructed in the same manner. This paper describes the creation of the evaluation datasets and guidelines for their use. Nature Publishing Group UK 2021-07-16 /pmc/articles/PMC8285420/ /pubmed/34272388 http://dx.doi.org/10.1038/s41597-021-00967-y Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) applies to the metadata files associated with this article. |
spellingShingle | Data Descriptor Rutherford, Michael Mun, Seong K. Levine, Betty Bennett, William Smith, Kirk Farmer, Phil Jarosz, Quasar Wagner, Ulrike Freyman, John Blake, Geri Tarbox, Lawrence Farahani, Keyvan Prior, Fred A DICOM dataset for evaluation of medical image de-identification |
title | A DICOM dataset for evaluation of medical image de-identification |
title_full | A DICOM dataset for evaluation of medical image de-identification |
title_fullStr | A DICOM dataset for evaluation of medical image de-identification |
title_full_unstemmed | A DICOM dataset for evaluation of medical image de-identification |
title_short | A DICOM dataset for evaluation of medical image de-identification |
title_sort | dicom dataset for evaluation of medical image de-identification |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285420/ https://www.ncbi.nlm.nih.gov/pubmed/34272388 http://dx.doi.org/10.1038/s41597-021-00967-y |
work_keys_str_mv | AT rutherfordmichael adicomdatasetforevaluationofmedicalimagedeidentification AT munseongk adicomdatasetforevaluationofmedicalimagedeidentification AT levinebetty adicomdatasetforevaluationofmedicalimagedeidentification AT bennettwilliam adicomdatasetforevaluationofmedicalimagedeidentification AT smithkirk adicomdatasetforevaluationofmedicalimagedeidentification AT farmerphil adicomdatasetforevaluationofmedicalimagedeidentification AT jaroszquasar adicomdatasetforevaluationofmedicalimagedeidentification AT wagnerulrike adicomdatasetforevaluationofmedicalimagedeidentification AT freymanjohn adicomdatasetforevaluationofmedicalimagedeidentification AT blakegeri adicomdatasetforevaluationofmedicalimagedeidentification AT tarboxlawrence adicomdatasetforevaluationofmedicalimagedeidentification AT farahanikeyvan adicomdatasetforevaluationofmedicalimagedeidentification AT priorfred adicomdatasetforevaluationofmedicalimagedeidentification AT rutherfordmichael dicomdatasetforevaluationofmedicalimagedeidentification AT munseongk dicomdatasetforevaluationofmedicalimagedeidentification AT levinebetty dicomdatasetforevaluationofmedicalimagedeidentification AT bennettwilliam dicomdatasetforevaluationofmedicalimagedeidentification AT smithkirk dicomdatasetforevaluationofmedicalimagedeidentification AT farmerphil dicomdatasetforevaluationofmedicalimagedeidentification AT jaroszquasar dicomdatasetforevaluationofmedicalimagedeidentification AT wagnerulrike dicomdatasetforevaluationofmedicalimagedeidentification AT freymanjohn dicomdatasetforevaluationofmedicalimagedeidentification AT blakegeri dicomdatasetforevaluationofmedicalimagedeidentification AT tarboxlawrence dicomdatasetforevaluationofmedicalimagedeidentification AT farahanikeyvan dicomdatasetforevaluationofmedicalimagedeidentification AT priorfred dicomdatasetforevaluationofmedicalimagedeidentification |