Cargando…

Distinct Human Gut Microbial Taxonomic Signatures Uncovered With Different Sample Processing and Microbial Cell Disruption Methods for Metaproteomic Analysis

The use of metaproteomics for studying the human gut microbiota can shed light on the taxonomic profile and the functional role of the microbial community. Nevertheless, methods for extracting proteins from stool samples continue to evolve, in the pursuit of optimal protocols for moistening and disp...

Descripción completa

Detalles Bibliográficos
Autores principales:	García-Durán, Carmen, Martínez-López, Raquel, Zapico, Inés, Pérez, Enrique, Romeu, Eduardo, Arroyo, Javier, Hernáez, María Luisa, Pitarch, Aida, Monteoliva, Lucía, Gil, Concha
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2021
Materias:	Microbiology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8287257/ https://www.ncbi.nlm.nih.gov/pubmed/34290676 http://dx.doi.org/10.3389/fmicb.2021.618566

Ejemplares similares

Metaproteomic Insights Into the Microbial Community in Pozol
por: Rizo, Jocelin, et al.
Publicado: (2021)

Metaproteomic analysis of Chesapeake Bay microbial communities
por: Kan, Jinjun, et al.
Publicado: (2005)

Metaproteomics of complex microbial communities in biogas plants
por: Heyer, Robert, et al.
Publicado: (2015)

The rumen microbial metaproteome as revealed by SDS-PAGE
por: Snelling, Timothy J., et al.
Publicado: (2017)

Statistical Evaluation of Metaproteomics and 16S rRNA Amplicon Sequencing Techniques for Study of Gut Microbiota Establishment in Infants with Cystic Fibrosis
por: Saralegui, Claudia, et al.
Publicado: (2022)

Exploring mixed microbial community functioning: recent advances in metaproteomics
por: Siggins, Alma, et al.
Publicado: (2012)

Assessing species biomass contributions in microbial communities via metaproteomics
por: Kleiner, Manuel, et al.
Publicado: (2017)

Microbial metaproteome data from decayed beech dead wood
por: Kipping, Lydia, et al.
Publicado: (2020)

Metaproteomic and Metagenomic-Coupled Approach to Investigate Microbial Response to Electrochemical Conditions in Microbial Fuel Cells
por: Godain, Alexiane, et al.
Publicado: (2023)

Extending the Proteomic Characterization of Candida albicans Exposed to Stress and Apoptotic Inducers through Data-Independent Acquisition Mass Spectrometry
por: Amador-García, Ahinara, et al.
Publicado: (2021)

Metaproteomics-guided selection of targeted enzymes for bioprospecting of mixed microbial communities
por: Speda, Jutta, et al.
Publicado: (2017)

Metaproteomics: Much More than Measuring Gene Expression in Microbial Communities
por: Kleiner, Manuel
Publicado: (2019)

Deciphering the Functioning of Microbial Communities: Shedding Light on the Critical Steps in Metaproteomics
por: Géron, Augustin, et al.
Publicado: (2019)

An Innovative Protocol for Metaproteomic Analyses of Microbial Pathogens in Cystic Fibrosis Sputum
por: Graf, Alexander C., et al.
Publicado: (2021)

Introducing untargeted data-independent acquisition for metaproteomics of complex microbial samples
por: Pietilä, Sami, et al.
Publicado: (2022)

Metagenomic and metaproteomic analyses of a corn stover-adapted microbial consortium EMSD5 reveal its taxonomic and enzymatic basis for degrading lignocellulose
por: Zhu, Ning, et al.
Publicado: (2016)

Comprehensive Metabolic and Taxonomic Reconstruction of an Ancient Microbial Mat From the McMurdo Ice Shelf (Antarctica) by Integrating Genetic, Metaproteomic and Lipid Biomarker Analyses
por: Lezcano, María Ángeles, et al.
Publicado: (2022)

A Metaproteomic Approach to Study Human-Microbial Ecosystems at the Mucosal Luminal Interface
por: Li, Xiaoxiao, et al.
Publicado: (2011)

Metaproteomics method to determine carbon sources and assimilation pathways of species in microbial communities
por: Kleiner, Manuel, et al.
Publicado: (2018)

Microbial diversity and metaproteomic analysis of activated sludge responses to naphthalene and anthracene exposure
por: Li, Shanshan, et al.
Publicado: (2019)

ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis
por: Mooradian, Arshag D., et al.
Publicado: (2020)

An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome
por: Nalpas, Nicolas, et al.
Publicado: (2021)

Mass Spectrometry-Based Proteomic and Immunoproteomic Analyses of the Candida albicans Hyphal Secretome Reveal Diagnostic Biomarker Candidates for Invasive Candidiasis
por: Vaz, Catarina, et al.
Publicado: (2021)

Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions
por: Schneider, Thomas, et al.
Publicado: (2012)

A Metaproteomic Analysis of the Response of a Freshwater Microbial Community under Nutrient Enrichment
por: Russo, David A., et al.
Publicado: (2016)

Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics
por: Bergauer, Kristin, et al.
Publicado: (2018)

Metaproteomics analysis of microbial diversity of human saliva and tongue dorsum in young healthy individuals
por: Rabe, Alexander, et al.
Publicado: (2019)

Increasing taxonomic and functional characterization of host-microbiome interactions by DIA-PASEF metaproteomics
por: Gómez-Varela, David, et al.
Publicado: (2023)

Microbial metal‐sulfide oxidation in inactive hydrothermal vent chimneys suggested by metagenomic and metaproteomic analyses
por: Meier, Dimitri V., et al.
Publicado: (2019)

Quantitative metaproteomics reveals composition and metabolism characteristics of microbial communities in Chinese liquor fermentation starters
por: Zhao, Jinzhi, et al.
Publicado: (2023)

Metagenomic and metaproteomic analyses of microbial amino acid metabolism during Cantonese soy sauce fermentation
por: Chen, Cong, et al.
Publicado: (2023)

Candida albicans Hyphal Extracellular Vesicles Are Different from Yeast Ones, Carrying an Active Proteasome Complex and Showing a Different Role in Host Immune Response
por: Martínez-López, Raquel, et al.
Publicado: (2022)

Top-down characterization data on the speciation of the Candida albicans immunome in candidemia
por: Pitarch, Aida, et al.
Publicado: (2015)

Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics
por: Lee, Joon-Yong, et al.
Publicado: (2022)

Microbial Interactions Drive Distinct Taxonomic and Potential Metabolic Responses to Habitats in Karst Cave Ecosystem
por: Ma, Liyuan, et al.
Publicado: (2021)

Unraveling Gardnerella vaginalis Surface Proteins Using Cell Shaving Proteomics
por: Marín, Elvira, et al.
Publicado: (2018)

An Integrated Metagenomics/Metaproteomics Investigation of the Microbial Communities and Enzymes in Solid-state Fermentation of Pu-erh tea
por: Zhao, Ming, et al.
Publicado: (2015)

Metaproteomics reveals major microbial players and their biodegradation functions in a large-scale aerobic composting plant
por: Liu, Dongming, et al.
Publicado: (2015)

Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants
por: Hassa, Julia, et al.
Publicado: (2018)

Metaproteome analysis reveals that syntrophy, competition, and phage-host interaction shape microbial communities in biogas plants
por: Heyer, R., et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_05cgbv8dmuo5c9g5iq38s2dhql