Cargando…

Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma

Clear cell renal cell carcinoma (ccRCC) is one of the tumor types with sensitivity to ferroptosis, and immunotherapy has emerged as a standard pillar for metastatic ccRCC treatment, while it remains largely obscure whether ferroptosis influences the tumor immune microenvironment in ccRCC. Based on a...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Song, Chen, Shiming, Ying, Yufan, Ma, Xueyou, Shen, Haixiang, Li, Jiangfeng, Wang, Xiao, Lin, Yiwei, Liu, Ben, Zheng, Xiangyi, Xie, Liping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8287329/
https://www.ncbi.nlm.nih.gov/pubmed/34291048
http://dx.doi.org/10.3389/fcell.2021.676142
_version_ 1783723894069264384
author Wang, Song
Chen, Shiming
Ying, Yufan
Ma, Xueyou
Shen, Haixiang
Li, Jiangfeng
Wang, Xiao
Lin, Yiwei
Liu, Ben
Zheng, Xiangyi
Xie, Liping
author_facet Wang, Song
Chen, Shiming
Ying, Yufan
Ma, Xueyou
Shen, Haixiang
Li, Jiangfeng
Wang, Xiao
Lin, Yiwei
Liu, Ben
Zheng, Xiangyi
Xie, Liping
author_sort Wang, Song
collection PubMed
description Clear cell renal cell carcinoma (ccRCC) is one of the tumor types with sensitivity to ferroptosis, and immunotherapy has emerged as a standard pillar for metastatic ccRCC treatment, while it remains largely obscure whether ferroptosis influences the tumor immune microenvironment in ccRCC. Based on available data in The Cancer Genome Atlas, divergent expression profiles of ferroptosis regulators were noted in ccRCC and normal tissues, and we also found that the ferroptosis regulators correlated with the PD-L1 expression. Two independent subtypes were determined by consensus clustering analysis according to the expression level of ferroptosis regulators in ccRCC. Cluster 1 showed lower histological tumor stage and grade, more favorable prognosis, and higher PD-L1 expression compared to cluster 2. CIBERSORT analysis revealed that cluster 2 harbored higher infiltrated levels of CD8+ T cell, Tregs, and T follicular helper cell, while cluster 1 more correlated with the monocyte, M1 macrophage, and M2 macrophage. Gene set enrichment analysis indicated that the ERBB signaling and JAK_STAT signaling pathways were significantly enriched in cluster 1. We subsequently identified CARS as the potentially key immune infiltration-related ferroptosis regulator, whose high expression showed dismal prognosis and was positively correlated with PD-L1 expression in ccRCC. We also verified the upregulation of CARS in ccRCC tissues and cell lines via qRT-PCR method. Additionally, a pan-cancer analysis demonstrated that CARS closely related to the expression of immune checkpoint-related genes (especially PD-L1) and an unfavorable prognosis in diverse cancer types. In summary, our study suggested the crucial role of ferroptosis in immune infiltration of ccRCC, and CARS is a potentially novel prognostic biomarker and potential target for cancer immunotherapy.
format Online
Article
Text
id pubmed-8287329
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-82873292021-07-20 Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma Wang, Song Chen, Shiming Ying, Yufan Ma, Xueyou Shen, Haixiang Li, Jiangfeng Wang, Xiao Lin, Yiwei Liu, Ben Zheng, Xiangyi Xie, Liping Front Cell Dev Biol Cell and Developmental Biology Clear cell renal cell carcinoma (ccRCC) is one of the tumor types with sensitivity to ferroptosis, and immunotherapy has emerged as a standard pillar for metastatic ccRCC treatment, while it remains largely obscure whether ferroptosis influences the tumor immune microenvironment in ccRCC. Based on available data in The Cancer Genome Atlas, divergent expression profiles of ferroptosis regulators were noted in ccRCC and normal tissues, and we also found that the ferroptosis regulators correlated with the PD-L1 expression. Two independent subtypes were determined by consensus clustering analysis according to the expression level of ferroptosis regulators in ccRCC. Cluster 1 showed lower histological tumor stage and grade, more favorable prognosis, and higher PD-L1 expression compared to cluster 2. CIBERSORT analysis revealed that cluster 2 harbored higher infiltrated levels of CD8+ T cell, Tregs, and T follicular helper cell, while cluster 1 more correlated with the monocyte, M1 macrophage, and M2 macrophage. Gene set enrichment analysis indicated that the ERBB signaling and JAK_STAT signaling pathways were significantly enriched in cluster 1. We subsequently identified CARS as the potentially key immune infiltration-related ferroptosis regulator, whose high expression showed dismal prognosis and was positively correlated with PD-L1 expression in ccRCC. We also verified the upregulation of CARS in ccRCC tissues and cell lines via qRT-PCR method. Additionally, a pan-cancer analysis demonstrated that CARS closely related to the expression of immune checkpoint-related genes (especially PD-L1) and an unfavorable prognosis in diverse cancer types. In summary, our study suggested the crucial role of ferroptosis in immune infiltration of ccRCC, and CARS is a potentially novel prognostic biomarker and potential target for cancer immunotherapy. Frontiers Media S.A. 2021-07-05 /pmc/articles/PMC8287329/ /pubmed/34291048 http://dx.doi.org/10.3389/fcell.2021.676142 Text en Copyright © 2021 Wang, Chen, Ying, Ma, Shen, Li, Wang, Lin, Liu, Zheng and Xie. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Wang, Song
Chen, Shiming
Ying, Yufan
Ma, Xueyou
Shen, Haixiang
Li, Jiangfeng
Wang, Xiao
Lin, Yiwei
Liu, Ben
Zheng, Xiangyi
Xie, Liping
Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma
title Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma
title_full Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma
title_fullStr Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma
title_full_unstemmed Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma
title_short Comprehensive Analysis of Ferroptosis Regulators With Regard to PD-L1 and Immune Infiltration in Clear Cell Renal Cell Carcinoma
title_sort comprehensive analysis of ferroptosis regulators with regard to pd-l1 and immune infiltration in clear cell renal cell carcinoma
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8287329/
https://www.ncbi.nlm.nih.gov/pubmed/34291048
http://dx.doi.org/10.3389/fcell.2021.676142
work_keys_str_mv AT wangsong comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT chenshiming comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT yingyufan comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT maxueyou comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT shenhaixiang comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT lijiangfeng comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT wangxiao comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT linyiwei comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT liuben comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT zhengxiangyi comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma
AT xieliping comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinclearcellrenalcellcarcinoma