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Using Proper Mean Generation Intervals in Modeling of COVID-19

In susceptible–exposed–infectious–recovered (SEIR) epidemic models, with the exponentially distributed duration of exposed/infectious statuses, the mean generation interval (GI, time lag between infections of a primary case and its secondary case) equals the mean latent period (LP) plus the mean inf...

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Autores principales: Tang, Xiujuan, Musa, Salihu S., Zhao, Shi, Mei, Shujiang, He, Daihai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8287506/
https://www.ncbi.nlm.nih.gov/pubmed/34291032
http://dx.doi.org/10.3389/fpubh.2021.691262
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author Tang, Xiujuan
Musa, Salihu S.
Zhao, Shi
Mei, Shujiang
He, Daihai
author_facet Tang, Xiujuan
Musa, Salihu S.
Zhao, Shi
Mei, Shujiang
He, Daihai
author_sort Tang, Xiujuan
collection PubMed
description In susceptible–exposed–infectious–recovered (SEIR) epidemic models, with the exponentially distributed duration of exposed/infectious statuses, the mean generation interval (GI, time lag between infections of a primary case and its secondary case) equals the mean latent period (LP) plus the mean infectious period (IP). It was widely reported that the GI for COVID-19 is as short as 5 days. However, many works in top journals used longer LP or IP with the sum (i.e., GI), e.g., >7 days. This discrepancy will lead to overestimated basic reproductive number and exaggerated expectation of infection attack rate (AR) and control efficacy. We argue that it is important to use suitable epidemiological parameter values for proper estimation/prediction. Furthermore, we propose an epidemic model to assess the transmission dynamics of COVID-19 for Belgium, Israel, and the United Arab Emirates (UAE). We estimated a time-varying reproductive number [R(0)(t)] based on the COVID-19 deaths data and we found that Belgium has the highest AR followed by Israel and the UAE.
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spelling pubmed-82875062021-07-20 Using Proper Mean Generation Intervals in Modeling of COVID-19 Tang, Xiujuan Musa, Salihu S. Zhao, Shi Mei, Shujiang He, Daihai Front Public Health Public Health In susceptible–exposed–infectious–recovered (SEIR) epidemic models, with the exponentially distributed duration of exposed/infectious statuses, the mean generation interval (GI, time lag between infections of a primary case and its secondary case) equals the mean latent period (LP) plus the mean infectious period (IP). It was widely reported that the GI for COVID-19 is as short as 5 days. However, many works in top journals used longer LP or IP with the sum (i.e., GI), e.g., >7 days. This discrepancy will lead to overestimated basic reproductive number and exaggerated expectation of infection attack rate (AR) and control efficacy. We argue that it is important to use suitable epidemiological parameter values for proper estimation/prediction. Furthermore, we propose an epidemic model to assess the transmission dynamics of COVID-19 for Belgium, Israel, and the United Arab Emirates (UAE). We estimated a time-varying reproductive number [R(0)(t)] based on the COVID-19 deaths data and we found that Belgium has the highest AR followed by Israel and the UAE. Frontiers Media S.A. 2021-07-05 /pmc/articles/PMC8287506/ /pubmed/34291032 http://dx.doi.org/10.3389/fpubh.2021.691262 Text en Copyright © 2021 Tang, Musa, Zhao, Mei and He. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Public Health
Tang, Xiujuan
Musa, Salihu S.
Zhao, Shi
Mei, Shujiang
He, Daihai
Using Proper Mean Generation Intervals in Modeling of COVID-19
title Using Proper Mean Generation Intervals in Modeling of COVID-19
title_full Using Proper Mean Generation Intervals in Modeling of COVID-19
title_fullStr Using Proper Mean Generation Intervals in Modeling of COVID-19
title_full_unstemmed Using Proper Mean Generation Intervals in Modeling of COVID-19
title_short Using Proper Mean Generation Intervals in Modeling of COVID-19
title_sort using proper mean generation intervals in modeling of covid-19
topic Public Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8287506/
https://www.ncbi.nlm.nih.gov/pubmed/34291032
http://dx.doi.org/10.3389/fpubh.2021.691262
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