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Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate
A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic bacterium, designated type strain SSI9(T), was isolated from sand fly (Phlebotomus papatasi Scopoli; Diptera: Psychodidae) rearing substrate and subjected to polyphasic taxonomic analysis. Strain SSI9(T) contained phosphatidyl...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Microbiology Society
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8289205/ https://www.ncbi.nlm.nih.gov/pubmed/33956595 http://dx.doi.org/10.1099/ijsem.0.004809 |
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author | Kakumanu, Madhavi L. Marayati, Bahjat Fadi Wada-Katsumata, Ayako Wasserberg, Gideon Schal, Coby Apperson, Charles S. Ponnusamy, Loganathan |
author_facet | Kakumanu, Madhavi L. Marayati, Bahjat Fadi Wada-Katsumata, Ayako Wasserberg, Gideon Schal, Coby Apperson, Charles S. Ponnusamy, Loganathan |
author_sort | Kakumanu, Madhavi L. |
collection | PubMed |
description | A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic bacterium, designated type strain SSI9(T), was isolated from sand fly (Phlebotomus papatasi Scopoli; Diptera: Psychodidae) rearing substrate and subjected to polyphasic taxonomic analysis. Strain SSI9(T) contained phosphatidylethanolamine as a major polar lipid, MK-7 as the predominant quinone, and C(16 : 1)ω6c/C(16 : 1)ω7c, iso-C(15 : 0), iso-C(17 : 0) 3-OH and C(16 : 0) as the major cellular fatty acids. Phylogenetic analysis based on 16S rRNA gene sequences revealed that SSI9(T) represents a member of the genus Sphingobacterium , of the family Sphingobacteriaceae sharing 96.5–88.0 % sequence similarity with other species of the genus Sphingobacterium . The results of multilocus sequence analysis using the concatenated sequences of the housekeeping genes recA, rplC and groL indicated that SSI9(T) formed a separate branch in the genus Sphingobacterium . The genome of SSI9(T) is 5 197 142 bp with a DNA G+C content of 41.8 mol% and encodes 4395 predicted coding sequences, 49 tRNAs, and three complete rRNAs and two partial rRNAs. SSI9(T) could be distinguished from other species of the genus Sphingobacterium with validly published names by several phenotypic, chemotaxonomic and genomic characteristics. On the basis of the results of this polyphasic taxonomic analysis, the bacterial isolate represents a novel species within the genus Sphingobacterium , for which the name Sphingobacterium phlebotomi sp. nov. is proposed. The type strain is SSI9(T) (=ATCC TSD-210(T)=LMG 31664(T)=NRRL B-65603(T)). |
format | Online Article Text |
id | pubmed-8289205 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Microbiology Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-82892052021-07-20 Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate Kakumanu, Madhavi L. Marayati, Bahjat Fadi Wada-Katsumata, Ayako Wasserberg, Gideon Schal, Coby Apperson, Charles S. Ponnusamy, Loganathan Int J Syst Evol Microbiol New Taxa A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic bacterium, designated type strain SSI9(T), was isolated from sand fly (Phlebotomus papatasi Scopoli; Diptera: Psychodidae) rearing substrate and subjected to polyphasic taxonomic analysis. Strain SSI9(T) contained phosphatidylethanolamine as a major polar lipid, MK-7 as the predominant quinone, and C(16 : 1)ω6c/C(16 : 1)ω7c, iso-C(15 : 0), iso-C(17 : 0) 3-OH and C(16 : 0) as the major cellular fatty acids. Phylogenetic analysis based on 16S rRNA gene sequences revealed that SSI9(T) represents a member of the genus Sphingobacterium , of the family Sphingobacteriaceae sharing 96.5–88.0 % sequence similarity with other species of the genus Sphingobacterium . The results of multilocus sequence analysis using the concatenated sequences of the housekeeping genes recA, rplC and groL indicated that SSI9(T) formed a separate branch in the genus Sphingobacterium . The genome of SSI9(T) is 5 197 142 bp with a DNA G+C content of 41.8 mol% and encodes 4395 predicted coding sequences, 49 tRNAs, and three complete rRNAs and two partial rRNAs. SSI9(T) could be distinguished from other species of the genus Sphingobacterium with validly published names by several phenotypic, chemotaxonomic and genomic characteristics. On the basis of the results of this polyphasic taxonomic analysis, the bacterial isolate represents a novel species within the genus Sphingobacterium , for which the name Sphingobacterium phlebotomi sp. nov. is proposed. The type strain is SSI9(T) (=ATCC TSD-210(T)=LMG 31664(T)=NRRL B-65603(T)). Microbiology Society 2021-05-06 /pmc/articles/PMC8289205/ /pubmed/33956595 http://dx.doi.org/10.1099/ijsem.0.004809 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License. This article was made open access via a Publish and Read agreement between the Microbiology Society and the corresponding author’s institution. |
spellingShingle | New Taxa Kakumanu, Madhavi L. Marayati, Bahjat Fadi Wada-Katsumata, Ayako Wasserberg, Gideon Schal, Coby Apperson, Charles S. Ponnusamy, Loganathan Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate |
title |
Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate |
title_full |
Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate |
title_fullStr |
Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate |
title_full_unstemmed |
Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate |
title_short |
Sphingobacterium phlebotomi sp. nov., a new member of family Sphingobacteriaceae isolated from sand fly rearing substrate |
title_sort | sphingobacterium phlebotomi sp. nov., a new member of family sphingobacteriaceae isolated from sand fly rearing substrate |
topic | New Taxa |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8289205/ https://www.ncbi.nlm.nih.gov/pubmed/33956595 http://dx.doi.org/10.1099/ijsem.0.004809 |
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