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Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat

A Gram-stain-positive, strictly aerobic, spore-forming, rod-shaped and non-motile bacterium designated strain SIJ1(T) was obtained from tidal flat sediment collected from the northern shore of Kuwait Bay, northwest of the Arabian Gulf. Strain SIJ1(T) grew optimally at 30 °C and pH 7–8 in the presenc...

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Autores principales: Mahmoud, Huda, Eapen, Susan, Al-Bajjali, Fatimah, Al-Qattan, Anwar, Jose, Liny
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8289215/
https://www.ncbi.nlm.nih.gov/pubmed/33909547
http://dx.doi.org/10.1099/ijsem.0.004792
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author Mahmoud, Huda
Eapen, Susan
Al-Bajjali, Fatimah
Al-Qattan, Anwar
Jose, Liny
author_facet Mahmoud, Huda
Eapen, Susan
Al-Bajjali, Fatimah
Al-Qattan, Anwar
Jose, Liny
author_sort Mahmoud, Huda
collection PubMed
description A Gram-stain-positive, strictly aerobic, spore-forming, rod-shaped and non-motile bacterium designated strain SIJ1(T) was obtained from tidal flat sediment collected from the northern shore of Kuwait Bay, northwest of the Arabian Gulf. Strain SIJ1(T) grew optimally at 30 °C and pH 7–8 in the presence of 6 % (w/v) NaCl. The cell-wall peptidoglycan was based on meso-diaminopimelic acid and an unsaturated menaquinone with seven isoprene units (MK-7) was the predominant respiratory quinone. It contained anteiso-C(15 : 0), iso-C(16 : 0) and iso-C(15 : 0) as the major fatty acids and ribose as the major whole-cell sugar. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, unidentified phospholipid, an unidentified glycolipid, phosphoglycolipid and an unidentified lipid. Phylogenetic analysis based on 16S rRNA genes revealed that SIJ1(T) showed a distinct evolutionary lineage within the Firmicutes. The DNA G+C content was 43.1 mol% and the full genome analysis for strain SIJ1(T) showed that it had a genome size of 3 989 945 bp and contained 4085 predicted protein-encoding genes. The SIJ1(T) annotated genome showed more stress resistance encoding genes in comparison to its closely related strains. The amino acid identity and average nucleotide identity data for the whole genome proved that strain SIJ1(T) does indeed represent a novel genus. The strain was distinguishable from the phylogenetically related genera through differences in several phenotypic properties. On the basis of the phenotypic, phylogenetic and genetic data, strain SIJ1(T) represents a novel genus and species in the family Bacillaceae, for which the name Litoribacterium kuwaitense gen. nov., sp. nov. is proposed. The type strain is SIJ1(T) (=DSM 28862(T)=LMG 28316(T)).
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spelling pubmed-82892152021-07-20 Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat Mahmoud, Huda Eapen, Susan Al-Bajjali, Fatimah Al-Qattan, Anwar Jose, Liny Int J Syst Evol Microbiol New Taxa A Gram-stain-positive, strictly aerobic, spore-forming, rod-shaped and non-motile bacterium designated strain SIJ1(T) was obtained from tidal flat sediment collected from the northern shore of Kuwait Bay, northwest of the Arabian Gulf. Strain SIJ1(T) grew optimally at 30 °C and pH 7–8 in the presence of 6 % (w/v) NaCl. The cell-wall peptidoglycan was based on meso-diaminopimelic acid and an unsaturated menaquinone with seven isoprene units (MK-7) was the predominant respiratory quinone. It contained anteiso-C(15 : 0), iso-C(16 : 0) and iso-C(15 : 0) as the major fatty acids and ribose as the major whole-cell sugar. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, unidentified phospholipid, an unidentified glycolipid, phosphoglycolipid and an unidentified lipid. Phylogenetic analysis based on 16S rRNA genes revealed that SIJ1(T) showed a distinct evolutionary lineage within the Firmicutes. The DNA G+C content was 43.1 mol% and the full genome analysis for strain SIJ1(T) showed that it had a genome size of 3 989 945 bp and contained 4085 predicted protein-encoding genes. The SIJ1(T) annotated genome showed more stress resistance encoding genes in comparison to its closely related strains. The amino acid identity and average nucleotide identity data for the whole genome proved that strain SIJ1(T) does indeed represent a novel genus. The strain was distinguishable from the phylogenetically related genera through differences in several phenotypic properties. On the basis of the phenotypic, phylogenetic and genetic data, strain SIJ1(T) represents a novel genus and species in the family Bacillaceae, for which the name Litoribacterium kuwaitense gen. nov., sp. nov. is proposed. The type strain is SIJ1(T) (=DSM 28862(T)=LMG 28316(T)). Microbiology Society 2021-04-28 /pmc/articles/PMC8289215/ /pubmed/33909547 http://dx.doi.org/10.1099/ijsem.0.004792 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License.
spellingShingle New Taxa
Mahmoud, Huda
Eapen, Susan
Al-Bajjali, Fatimah
Al-Qattan, Anwar
Jose, Liny
Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat
title Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat
title_full Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat
title_fullStr Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat
title_full_unstemmed Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat
title_short Litoribacterium kuwaitense gen. nov., sp. nov., isolated from a Kuwait tidal flat
title_sort litoribacterium kuwaitense gen. nov., sp. nov., isolated from a kuwait tidal flat
topic New Taxa
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8289215/
https://www.ncbi.nlm.nih.gov/pubmed/33909547
http://dx.doi.org/10.1099/ijsem.0.004792
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