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Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis
The genera Catabacter (family ‘Catabacteraceae’) and Christensenella (family Christensenellaceae ) are close relatives within the phylum Firmicutes . Members of these genera are strictly anaerobic, non-spore-forming and short straight rods with diverse phenotypes. Phylogenetic analysis of 16S rRNA g...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Microbiology Society
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8289216/ https://www.ncbi.nlm.nih.gov/pubmed/33881979 http://dx.doi.org/10.1099/ijsem.0.004774 |
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author | Liu, Xiaoying Sutter, Jessica L. de la Cuesta-Zuluaga, Jacobo Waters, Jillian L. Youngblut, Nicholas D. Ley, Ruth E. |
author_facet | Liu, Xiaoying Sutter, Jessica L. de la Cuesta-Zuluaga, Jacobo Waters, Jillian L. Youngblut, Nicholas D. Ley, Ruth E. |
author_sort | Liu, Xiaoying |
collection | PubMed |
description | The genera Catabacter (family ‘Catabacteraceae’) and Christensenella (family Christensenellaceae ) are close relatives within the phylum Firmicutes . Members of these genera are strictly anaerobic, non-spore-forming and short straight rods with diverse phenotypes. Phylogenetic analysis of 16S rRNA genes suggest that Catabacter splits Christensenella into a polyphyletic clade. In an effort to ensure that family/genus names represent monophyletic clades, we performed a whole-genome based analysis of the genomes available for the cultured representatives of these genera: four species of Christensenella and two strains of Catabacter hongkongensis . A concatenated alignment of 135 shared protein sequences of single-copy core genes present in the included strains indicates that C. hongkongensis is indeed nested within the Christensenella clade. Based on their evolutionary relationship, we propose the transfer of Catabacter hongkongensis to the genus Christensenella as Christensenella hongkongensis comb. nov. |
format | Online Article Text |
id | pubmed-8289216 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Microbiology Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-82892162021-07-20 Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis Liu, Xiaoying Sutter, Jessica L. de la Cuesta-Zuluaga, Jacobo Waters, Jillian L. Youngblut, Nicholas D. Ley, Ruth E. Int J Syst Evol Microbiol New Taxa The genera Catabacter (family ‘Catabacteraceae’) and Christensenella (family Christensenellaceae ) are close relatives within the phylum Firmicutes . Members of these genera are strictly anaerobic, non-spore-forming and short straight rods with diverse phenotypes. Phylogenetic analysis of 16S rRNA genes suggest that Catabacter splits Christensenella into a polyphyletic clade. In an effort to ensure that family/genus names represent monophyletic clades, we performed a whole-genome based analysis of the genomes available for the cultured representatives of these genera: four species of Christensenella and two strains of Catabacter hongkongensis . A concatenated alignment of 135 shared protein sequences of single-copy core genes present in the included strains indicates that C. hongkongensis is indeed nested within the Christensenella clade. Based on their evolutionary relationship, we propose the transfer of Catabacter hongkongensis to the genus Christensenella as Christensenella hongkongensis comb. nov. Microbiology Society 2021-04-21 /pmc/articles/PMC8289216/ /pubmed/33881979 http://dx.doi.org/10.1099/ijsem.0.004774 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License. |
spellingShingle | New Taxa Liu, Xiaoying Sutter, Jessica L. de la Cuesta-Zuluaga, Jacobo Waters, Jillian L. Youngblut, Nicholas D. Ley, Ruth E. Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis |
title | Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis |
title_full | Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis |
title_fullStr | Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis |
title_full_unstemmed | Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis |
title_short | Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis |
title_sort | reclassification of catabacter hongkongensis as christensenella hongkongensis comb. nov. based on whole genome analysis |
topic | New Taxa |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8289216/ https://www.ncbi.nlm.nih.gov/pubmed/33881979 http://dx.doi.org/10.1099/ijsem.0.004774 |
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