Genome sequence of the coffee root-knot nematode Meloidogyne exigua

Root-knot nematodes (Meloidogyne spp.) cause serious damages on most crops. Here, we report a high-quality genome sequence of Meloidogyne exigua (population Mex1, Costa Rica), a major pathogen of coffee. Its mitogenome (20,974 bp) was first assembled and annotated. The nuclear genome was then constr...

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Detalles Bibliográficos
Autores principales: Thi Phan, Ngan, Besnard, Guillaume, Ouazahrou, Rania, Sánchez, William Solano, Gil, Lisa, Manzi, Sophie, Bellafiore, Stéphane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Exeley Inc. 2021
Materias:
Arts & Humanities
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8290501/
https://www.ncbi.nlm.nih.gov/pubmed/34296190
http://dx.doi.org/10.21307/jofnem-2021-065
Descripción
Sumario:Root-knot nematodes (Meloidogyne spp.) cause serious damages on most crops. Here, we report a high-quality genome sequence of Meloidogyne exigua (population Mex1, Costa Rica), a major pathogen of coffee. Its mitogenome (20,974 bp) was first assembled and annotated. The nuclear genome was then constructed consisting of 206 contigs, with an N50 length of 1.89 Mb and a total assembly length of 42.1 Mb.

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