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Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis
To better understand the diversity and phylogeny of Perlodidae, we sequenced and annotated the complete mitochondrial genome (mitogenome) of Arcynopteryx dichroa. This mitogenome was 16,215 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA unit genes...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291068/ https://www.ncbi.nlm.nih.gov/pubmed/34350358 http://dx.doi.org/10.1080/23802359.2021.1955764 |
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author | Guo, Xuan Dong, Xiaojiao Yang, Meng Gao, Shuo Wang, Ying |
author_facet | Guo, Xuan Dong, Xiaojiao Yang, Meng Gao, Shuo Wang, Ying |
author_sort | Guo, Xuan |
collection | PubMed |
description | To better understand the diversity and phylogeny of Perlodidae, we sequenced and annotated the complete mitochondrial genome (mitogenome) of Arcynopteryx dichroa. This mitogenome was 16,215 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA unit genes (rRNAs), and a control region like other plecopteran. The nucleotide composition of A. dichroa mitochondrial genome obviously biases toward A and T. The A + T content of the whole mitochondrial genome, the PCGs, tRNAs, rRNAs, and the control region were: 69.3%, 67.6%, 69.8%, 71.3%, and 78.7%. Phylogenetic relationship based on the concatenated sequences of 13 PCGs and two ribosomal RNAs showed that the family Perlodidae and Chloroperlidae are sister relationship, family Perlidae being the sister group to the clade (Perlodidae + Chloroperlidae). The monophyly of the family Perlodidae is well supported but the subfamily Perlodinae and Isoperlinae are not monophyletic groups. |
format | Online Article Text |
id | pubmed-8291068 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-82910682021-08-03 Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis Guo, Xuan Dong, Xiaojiao Yang, Meng Gao, Shuo Wang, Ying Mitochondrial DNA B Resour Mitogenome Announcement To better understand the diversity and phylogeny of Perlodidae, we sequenced and annotated the complete mitochondrial genome (mitogenome) of Arcynopteryx dichroa. This mitogenome was 16,215 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA unit genes (rRNAs), and a control region like other plecopteran. The nucleotide composition of A. dichroa mitochondrial genome obviously biases toward A and T. The A + T content of the whole mitochondrial genome, the PCGs, tRNAs, rRNAs, and the control region were: 69.3%, 67.6%, 69.8%, 71.3%, and 78.7%. Phylogenetic relationship based on the concatenated sequences of 13 PCGs and two ribosomal RNAs showed that the family Perlodidae and Chloroperlidae are sister relationship, family Perlidae being the sister group to the clade (Perlodidae + Chloroperlidae). The monophyly of the family Perlodidae is well supported but the subfamily Perlodinae and Isoperlinae are not monophyletic groups. Taylor & Francis 2021-07-19 /pmc/articles/PMC8291068/ /pubmed/34350358 http://dx.doi.org/10.1080/23802359.2021.1955764 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Guo, Xuan Dong, Xiaojiao Yang, Meng Gao, Shuo Wang, Ying Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis |
title | Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis |
title_full | Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis |
title_fullStr | Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis |
title_full_unstemmed | Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis |
title_short | Mitochondrial genome of Arcynopteryx dichroa (McLachlan, 1872) (Plecoptera: Perlodidae) and phylogenetic analysis |
title_sort | mitochondrial genome of arcynopteryx dichroa (mclachlan, 1872) (plecoptera: perlodidae) and phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291068/ https://www.ncbi.nlm.nih.gov/pubmed/34350358 http://dx.doi.org/10.1080/23802359.2021.1955764 |
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