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Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics

In the recent COVID-19 pandemic, mathematical modeling constitutes an important tool to evaluate the prospective effectiveness of non-pharmaceutical interventions (NPIs) and to guide policy-making. Most research is, however, centered around characterizing the epidemic based on point estimates like t...

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Autores principales: Großmann, Gerrit, Backenköhler, Michael, Wolf, Verena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291658/
https://www.ncbi.nlm.nih.gov/pubmed/34283842
http://dx.doi.org/10.1371/journal.pone.0250050
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author Großmann, Gerrit
Backenköhler, Michael
Wolf, Verena
author_facet Großmann, Gerrit
Backenköhler, Michael
Wolf, Verena
author_sort Großmann, Gerrit
collection PubMed
description In the recent COVID-19 pandemic, mathematical modeling constitutes an important tool to evaluate the prospective effectiveness of non-pharmaceutical interventions (NPIs) and to guide policy-making. Most research is, however, centered around characterizing the epidemic based on point estimates like the average infectiousness or the average number of contacts. In this work, we use stochastic simulations to investigate the consequences of a population’s heterogeneity regarding connectivity and individual viral load levels. Therefore, we translate a COVID-19 ODE model to a stochastic multi-agent system. We use contact networks to model complex interaction structures and a probabilistic infection rate to model individual viral load variation. We observe a large dependency of the dispersion and dynamical evolution on the population’s heterogeneity that is not adequately captured by point estimates, for instance, used in ODE models. In particular, models that assume the same clinical and transmission parameters may lead to different conclusions, depending on different types of heterogeneity in the population. For instance, the existence of hubs in the contact network leads to an initial increase of dispersion and the effective reproduction number, but to a lower herd immunity threshold (HIT) compared to homogeneous populations or a population where the heterogeneity stems solely from individual infectivity variations.
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spelling pubmed-82916582021-07-31 Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics Großmann, Gerrit Backenköhler, Michael Wolf, Verena PLoS One Research Article In the recent COVID-19 pandemic, mathematical modeling constitutes an important tool to evaluate the prospective effectiveness of non-pharmaceutical interventions (NPIs) and to guide policy-making. Most research is, however, centered around characterizing the epidemic based on point estimates like the average infectiousness or the average number of contacts. In this work, we use stochastic simulations to investigate the consequences of a population’s heterogeneity regarding connectivity and individual viral load levels. Therefore, we translate a COVID-19 ODE model to a stochastic multi-agent system. We use contact networks to model complex interaction structures and a probabilistic infection rate to model individual viral load variation. We observe a large dependency of the dispersion and dynamical evolution on the population’s heterogeneity that is not adequately captured by point estimates, for instance, used in ODE models. In particular, models that assume the same clinical and transmission parameters may lead to different conclusions, depending on different types of heterogeneity in the population. For instance, the existence of hubs in the contact network leads to an initial increase of dispersion and the effective reproduction number, but to a lower herd immunity threshold (HIT) compared to homogeneous populations or a population where the heterogeneity stems solely from individual infectivity variations. Public Library of Science 2021-07-20 /pmc/articles/PMC8291658/ /pubmed/34283842 http://dx.doi.org/10.1371/journal.pone.0250050 Text en © 2021 Großmann et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Großmann, Gerrit
Backenköhler, Michael
Wolf, Verena
Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics
title Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics
title_full Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics
title_fullStr Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics
title_full_unstemmed Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics
title_short Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics
title_sort heterogeneity matters: contact structure and individual variation shape epidemic dynamics
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291658/
https://www.ncbi.nlm.nih.gov/pubmed/34283842
http://dx.doi.org/10.1371/journal.pone.0250050
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