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Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications
Aggravation of the chronic obstructive pulmonary disease (COPD) often leads to a slew of complications, but the correlation between COPD aggravation and the complications on the basis of molecular level remains unclear. In this study, gene expression profiles of COPD in patients at early and aggrava...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291885/ https://www.ncbi.nlm.nih.gov/pubmed/33108241 http://dx.doi.org/10.1080/21655979.2020.1839216 |
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author | Cai, Yuchen Liu, Runhan Lu, Xinhe Zhang, Qiming Wang, Xinwei Lian, Huijing Wang, Haohua |
author_facet | Cai, Yuchen Liu, Runhan Lu, Xinhe Zhang, Qiming Wang, Xinwei Lian, Huijing Wang, Haohua |
author_sort | Cai, Yuchen |
collection | PubMed |
description | Aggravation of the chronic obstructive pulmonary disease (COPD) often leads to a slew of complications, but the correlation between COPD aggravation and the complications on the basis of molecular level remains unclear. In this study, gene expression profiles of COPD in patients at early and aggravation stages were collected and differentially-expressed genes were selected. Meanwhile, gene expression data implicated in COPD complications were analyzed to establish a regulatory network of COPD aggravation and COPD related complications. In addition, the gene enrichment function of DAVID6.7 was utilized to evaluate the similarities between COPD aggravation and COPD complications in term of biological process. By analyzing the genes of COPD aggravation and the COPD complications, we found 18 genes highly related to COPD aggravation, among which haptoglobin (HP) was correlated with 14 complications, followed by ADRB2, LCK and CA1, which were related to 13, 11 and 11 complications, respectively. As far as the complications concerned, obesity was regulated by 17 of the 18 genes, which indicated that there was a close correlation between COPD aggravation and obesity. Meanwhile, lung cancer, diabetes and heart failure were regulated by 15, 15 and 14 genes, respectively, among the 18 selected genes. This study suggested the driver genes of COPD aggravation were capable of extensively regulating COPD complications, which would provide a theoretical basis for development of cures for COPD and its complications. |
format | Online Article Text |
id | pubmed-8291885 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-82918852021-09-01 Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications Cai, Yuchen Liu, Runhan Lu, Xinhe Zhang, Qiming Wang, Xinwei Lian, Huijing Wang, Haohua Bioengineered Special Issue for International conference IBCC-2020 Aggravation of the chronic obstructive pulmonary disease (COPD) often leads to a slew of complications, but the correlation between COPD aggravation and the complications on the basis of molecular level remains unclear. In this study, gene expression profiles of COPD in patients at early and aggravation stages were collected and differentially-expressed genes were selected. Meanwhile, gene expression data implicated in COPD complications were analyzed to establish a regulatory network of COPD aggravation and COPD related complications. In addition, the gene enrichment function of DAVID6.7 was utilized to evaluate the similarities between COPD aggravation and COPD complications in term of biological process. By analyzing the genes of COPD aggravation and the COPD complications, we found 18 genes highly related to COPD aggravation, among which haptoglobin (HP) was correlated with 14 complications, followed by ADRB2, LCK and CA1, which were related to 13, 11 and 11 complications, respectively. As far as the complications concerned, obesity was regulated by 17 of the 18 genes, which indicated that there was a close correlation between COPD aggravation and obesity. Meanwhile, lung cancer, diabetes and heart failure were regulated by 15, 15 and 14 genes, respectively, among the 18 selected genes. This study suggested the driver genes of COPD aggravation were capable of extensively regulating COPD complications, which would provide a theoretical basis for development of cures for COPD and its complications. Taylor & Francis 2020-10-27 /pmc/articles/PMC8291885/ /pubmed/33108241 http://dx.doi.org/10.1080/21655979.2020.1839216 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Special Issue for International conference IBCC-2020 Cai, Yuchen Liu, Runhan Lu, Xinhe Zhang, Qiming Wang, Xinwei Lian, Huijing Wang, Haohua Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications |
title | Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications |
title_full | Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications |
title_fullStr | Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications |
title_full_unstemmed | Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications |
title_short | Correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications |
title_sort | correlation in gene expression between the aggravation of chronic obstructive pulmonary disease and the occurrence of complications |
topic | Special Issue for International conference IBCC-2020 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291885/ https://www.ncbi.nlm.nih.gov/pubmed/33108241 http://dx.doi.org/10.1080/21655979.2020.1839216 |
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