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Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value

Gastric cancer (GC) is one of the digestive tract malignancies with high invasion and mortality rates. Recent studies have reported that non-coding RNAs (ncRNAs) seem to play a crucial part in many tumors. Due to their high stability, ncRNAs may used as novel biomarkers to predict the occurrence and...

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Autores principales: Yu, Zhilong, Rong, ZeYin, Sheng, Jinxin, Luo, Zai, Zhang, Jianming, Li, Tengfei, Zhu, Zhonglin, Fu, Zhongmao, Qiu, Zhengjun, Huang, Chen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291998/
https://www.ncbi.nlm.nih.gov/pubmed/34295803
http://dx.doi.org/10.3389/fonc.2021.606764
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author Yu, Zhilong
Rong, ZeYin
Sheng, Jinxin
Luo, Zai
Zhang, Jianming
Li, Tengfei
Zhu, Zhonglin
Fu, Zhongmao
Qiu, Zhengjun
Huang, Chen
author_facet Yu, Zhilong
Rong, ZeYin
Sheng, Jinxin
Luo, Zai
Zhang, Jianming
Li, Tengfei
Zhu, Zhonglin
Fu, Zhongmao
Qiu, Zhengjun
Huang, Chen
author_sort Yu, Zhilong
collection PubMed
description Gastric cancer (GC) is one of the digestive tract malignancies with high invasion and mortality rates. Recent studies have reported that non-coding RNAs (ncRNAs) seem to play a crucial part in many tumors. Due to their high stability, ncRNAs may used as novel biomarkers to predict the occurrence and prognosis of GC. Here, we measured miRNA, lncRNA and cirRNA expression profiles of GC patients by using microarray and RNA-sequencing data from tissue samples. The diagnosis prediction model based on the ncRNA signatures and clinical features was evaluated by circulating and tissue validation and ROC analysis. Nine miRNAs and eight lncRNAs were obtained from the microarray analysis. Six miRNAs (miR-550a-5p, miRNA-936, miR-1306-3p, miR-3185, miR-6083, miR-6792-3p) and three lncRNAs (lnc-MB21D1-3:5, lnc-PSCA-4:2 and lnc-ABCC5-2:1) were abnormally expressed in circulating and tissue samples compared with normal control (NC), which was closely related to clinical pathology and survival time of GC patients; circRNA sequencing and qRT-PCR revealed four circRNAs (circASHL2, circCCDC9, circNHSL1 and cirMLLT10) were abnormally expressed in GC tissues and parts of them were negative relationship with their predicted binding miRNAs. These ncRNAs might act as promising molecular markers for the diagnosis and prognosis of gastric cancer.
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spelling pubmed-82919982021-07-21 Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value Yu, Zhilong Rong, ZeYin Sheng, Jinxin Luo, Zai Zhang, Jianming Li, Tengfei Zhu, Zhonglin Fu, Zhongmao Qiu, Zhengjun Huang, Chen Front Oncol Oncology Gastric cancer (GC) is one of the digestive tract malignancies with high invasion and mortality rates. Recent studies have reported that non-coding RNAs (ncRNAs) seem to play a crucial part in many tumors. Due to their high stability, ncRNAs may used as novel biomarkers to predict the occurrence and prognosis of GC. Here, we measured miRNA, lncRNA and cirRNA expression profiles of GC patients by using microarray and RNA-sequencing data from tissue samples. The diagnosis prediction model based on the ncRNA signatures and clinical features was evaluated by circulating and tissue validation and ROC analysis. Nine miRNAs and eight lncRNAs were obtained from the microarray analysis. Six miRNAs (miR-550a-5p, miRNA-936, miR-1306-3p, miR-3185, miR-6083, miR-6792-3p) and three lncRNAs (lnc-MB21D1-3:5, lnc-PSCA-4:2 and lnc-ABCC5-2:1) were abnormally expressed in circulating and tissue samples compared with normal control (NC), which was closely related to clinical pathology and survival time of GC patients; circRNA sequencing and qRT-PCR revealed four circRNAs (circASHL2, circCCDC9, circNHSL1 and cirMLLT10) were abnormally expressed in GC tissues and parts of them were negative relationship with their predicted binding miRNAs. These ncRNAs might act as promising molecular markers for the diagnosis and prognosis of gastric cancer. Frontiers Media S.A. 2021-07-06 /pmc/articles/PMC8291998/ /pubmed/34295803 http://dx.doi.org/10.3389/fonc.2021.606764 Text en Copyright © 2021 Yu, Rong, Sheng, Luo, Zhang, Li, Zhu, Fu, Qiu and Huang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Yu, Zhilong
Rong, ZeYin
Sheng, Jinxin
Luo, Zai
Zhang, Jianming
Li, Tengfei
Zhu, Zhonglin
Fu, Zhongmao
Qiu, Zhengjun
Huang, Chen
Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value
title Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value
title_full Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value
title_fullStr Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value
title_full_unstemmed Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value
title_short Aberrant Non-Coding RNA Expressed in Gastric Cancer and Its Diagnostic Value
title_sort aberrant non-coding rna expressed in gastric cancer and its diagnostic value
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8291998/
https://www.ncbi.nlm.nih.gov/pubmed/34295803
http://dx.doi.org/10.3389/fonc.2021.606764
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