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The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
Optical coherence tomography angiography (OCTA) provides several data regarding the status of retinal capillaries. This information can be further enlarged by employing quantitative metrics, such as vessel density (VD). A mandatory preliminary step of OCTA quantification is image binarization, a pro...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8292484/ https://www.ncbi.nlm.nih.gov/pubmed/34285328 http://dx.doi.org/10.1038/s41598-021-94333-y |
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author | Arrigo, Alessandro Aragona, Emanuela Saladino, Andrea Amato, Alessia Bandello, Francesco Battaglia Parodi, Maurizio |
author_facet | Arrigo, Alessandro Aragona, Emanuela Saladino, Andrea Amato, Alessia Bandello, Francesco Battaglia Parodi, Maurizio |
author_sort | Arrigo, Alessandro |
collection | PubMed |
description | Optical coherence tomography angiography (OCTA) provides several data regarding the status of retinal capillaries. This information can be further enlarged by employing quantitative metrics, such as vessel density (VD). A mandatory preliminary step of OCTA quantification is image binarization, a procedure used to highlight retinal capillaries on empty background. Although several binarization thresholds exist, no consensus is reached about the thresholding technique to be used. In this study, we tested thirteen binarization thresholds on a dataset made by thirty volunteers. The aim was to assess the impact of binarization techniques on: (I) detection of retinal capillaries, assessed by the calculation of overlapping percentages between binarized and original images; (II) quantitative OCTA metrics, including VD, vessel tortuosity (VT) and vessel dispersion (Vdisp); (III) foveal avascular zone (FAZ) detection. Our findings showed Huang, Li, Mean and Percentile as highly reliable binarization thresholds (p < 0.05), whereas the worst binarization thresholds were Intermodes, MaxEntropy, RenylEntropy and Yen (p < 0.05). All the thresholds variably underestimated VD metric and FAZ detection, with respect to the original OCTA images, whereas VT and Vdisp turned out to be more stable. The usage of a Fixed threshold resulted extremely useful to reduce VD and FAZ underestimations, although bound to operators’ experience. |
format | Online Article Text |
id | pubmed-8292484 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-82924842021-07-22 The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics Arrigo, Alessandro Aragona, Emanuela Saladino, Andrea Amato, Alessia Bandello, Francesco Battaglia Parodi, Maurizio Sci Rep Article Optical coherence tomography angiography (OCTA) provides several data regarding the status of retinal capillaries. This information can be further enlarged by employing quantitative metrics, such as vessel density (VD). A mandatory preliminary step of OCTA quantification is image binarization, a procedure used to highlight retinal capillaries on empty background. Although several binarization thresholds exist, no consensus is reached about the thresholding technique to be used. In this study, we tested thirteen binarization thresholds on a dataset made by thirty volunteers. The aim was to assess the impact of binarization techniques on: (I) detection of retinal capillaries, assessed by the calculation of overlapping percentages between binarized and original images; (II) quantitative OCTA metrics, including VD, vessel tortuosity (VT) and vessel dispersion (Vdisp); (III) foveal avascular zone (FAZ) detection. Our findings showed Huang, Li, Mean and Percentile as highly reliable binarization thresholds (p < 0.05), whereas the worst binarization thresholds were Intermodes, MaxEntropy, RenylEntropy and Yen (p < 0.05). All the thresholds variably underestimated VD metric and FAZ detection, with respect to the original OCTA images, whereas VT and Vdisp turned out to be more stable. The usage of a Fixed threshold resulted extremely useful to reduce VD and FAZ underestimations, although bound to operators’ experience. Nature Publishing Group UK 2021-07-20 /pmc/articles/PMC8292484/ /pubmed/34285328 http://dx.doi.org/10.1038/s41598-021-94333-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Arrigo, Alessandro Aragona, Emanuela Saladino, Andrea Amato, Alessia Bandello, Francesco Battaglia Parodi, Maurizio The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics |
title | The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics |
title_full | The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics |
title_fullStr | The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics |
title_full_unstemmed | The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics |
title_short | The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics |
title_sort | impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8292484/ https://www.ncbi.nlm.nih.gov/pubmed/34285328 http://dx.doi.org/10.1038/s41598-021-94333-y |
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