Cargando…

The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics

Optical coherence tomography angiography (OCTA) provides several data regarding the status of retinal capillaries. This information can be further enlarged by employing quantitative metrics, such as vessel density (VD). A mandatory preliminary step of OCTA quantification is image binarization, a pro...

Descripción completa

Detalles Bibliográficos
Autores principales: Arrigo, Alessandro, Aragona, Emanuela, Saladino, Andrea, Amato, Alessia, Bandello, Francesco, Battaglia Parodi, Maurizio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8292484/
https://www.ncbi.nlm.nih.gov/pubmed/34285328
http://dx.doi.org/10.1038/s41598-021-94333-y
_version_ 1783724838870843392
author Arrigo, Alessandro
Aragona, Emanuela
Saladino, Andrea
Amato, Alessia
Bandello, Francesco
Battaglia Parodi, Maurizio
author_facet Arrigo, Alessandro
Aragona, Emanuela
Saladino, Andrea
Amato, Alessia
Bandello, Francesco
Battaglia Parodi, Maurizio
author_sort Arrigo, Alessandro
collection PubMed
description Optical coherence tomography angiography (OCTA) provides several data regarding the status of retinal capillaries. This information can be further enlarged by employing quantitative metrics, such as vessel density (VD). A mandatory preliminary step of OCTA quantification is image binarization, a procedure used to highlight retinal capillaries on empty background. Although several binarization thresholds exist, no consensus is reached about the thresholding technique to be used. In this study, we tested thirteen binarization thresholds on a dataset made by thirty volunteers. The aim was to assess the impact of binarization techniques on: (I) detection of retinal capillaries, assessed by the calculation of overlapping percentages between binarized and original images; (II) quantitative OCTA metrics, including VD, vessel tortuosity (VT) and vessel dispersion (Vdisp); (III) foveal avascular zone (FAZ) detection. Our findings showed Huang, Li, Mean and Percentile as highly reliable binarization thresholds (p < 0.05), whereas the worst binarization thresholds were Intermodes, MaxEntropy, RenylEntropy and Yen (p < 0.05). All the thresholds variably underestimated VD metric and FAZ detection, with respect to the original OCTA images, whereas VT and Vdisp turned out to be more stable. The usage of a Fixed threshold resulted extremely useful to reduce VD and FAZ underestimations, although bound to operators’ experience.
format Online
Article
Text
id pubmed-8292484
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-82924842021-07-22 The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics Arrigo, Alessandro Aragona, Emanuela Saladino, Andrea Amato, Alessia Bandello, Francesco Battaglia Parodi, Maurizio Sci Rep Article Optical coherence tomography angiography (OCTA) provides several data regarding the status of retinal capillaries. This information can be further enlarged by employing quantitative metrics, such as vessel density (VD). A mandatory preliminary step of OCTA quantification is image binarization, a procedure used to highlight retinal capillaries on empty background. Although several binarization thresholds exist, no consensus is reached about the thresholding technique to be used. In this study, we tested thirteen binarization thresholds on a dataset made by thirty volunteers. The aim was to assess the impact of binarization techniques on: (I) detection of retinal capillaries, assessed by the calculation of overlapping percentages between binarized and original images; (II) quantitative OCTA metrics, including VD, vessel tortuosity (VT) and vessel dispersion (Vdisp); (III) foveal avascular zone (FAZ) detection. Our findings showed Huang, Li, Mean and Percentile as highly reliable binarization thresholds (p < 0.05), whereas the worst binarization thresholds were Intermodes, MaxEntropy, RenylEntropy and Yen (p < 0.05). All the thresholds variably underestimated VD metric and FAZ detection, with respect to the original OCTA images, whereas VT and Vdisp turned out to be more stable. The usage of a Fixed threshold resulted extremely useful to reduce VD and FAZ underestimations, although bound to operators’ experience. Nature Publishing Group UK 2021-07-20 /pmc/articles/PMC8292484/ /pubmed/34285328 http://dx.doi.org/10.1038/s41598-021-94333-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Arrigo, Alessandro
Aragona, Emanuela
Saladino, Andrea
Amato, Alessia
Bandello, Francesco
Battaglia Parodi, Maurizio
The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
title The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
title_full The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
title_fullStr The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
title_full_unstemmed The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
title_short The impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
title_sort impact of different thresholds on optical coherence tomography angiography images binarization and quantitative metrics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8292484/
https://www.ncbi.nlm.nih.gov/pubmed/34285328
http://dx.doi.org/10.1038/s41598-021-94333-y
work_keys_str_mv AT arrigoalessandro theimpactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT aragonaemanuela theimpactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT saladinoandrea theimpactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT amatoalessia theimpactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT bandellofrancesco theimpactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT battagliaparodimaurizio theimpactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT arrigoalessandro impactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT aragonaemanuela impactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT saladinoandrea impactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT amatoalessia impactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT bandellofrancesco impactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics
AT battagliaparodimaurizio impactofdifferentthresholdsonopticalcoherencetomographyangiographyimagesbinarizationandquantitativemetrics