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Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis

Tuberculosis has the most considerable death rate among diseases caused by a single micro-organism type. The disease is a significant issue for most third-world countries due to poor diagnosis and treatment potentials. Early diagnosis of tuberculosis is the most effective way of managing the disease...

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Autores principales: Osamor, Victor Chukwudi, Okezie, Adaugo Fiona
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8292494/
https://www.ncbi.nlm.nih.gov/pubmed/34285324
http://dx.doi.org/10.1038/s41598-021-94347-6
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author Osamor, Victor Chukwudi
Okezie, Adaugo Fiona
author_facet Osamor, Victor Chukwudi
Okezie, Adaugo Fiona
author_sort Osamor, Victor Chukwudi
collection PubMed
description Tuberculosis has the most considerable death rate among diseases caused by a single micro-organism type. The disease is a significant issue for most third-world countries due to poor diagnosis and treatment potentials. Early diagnosis of tuberculosis is the most effective way of managing the disease in patients to reduce the mortality rate of the infection. Despite several methods that exist in diagnosing tuberculosis, the limitations ranging from the cost in carrying out the test to the time taken to obtain the results have hindered early diagnosis of the disease. This work aims to develop a predictive model that would help in the diagnosis of TB using an extended weighted voting ensemble method. The method used to carry out this research involved analyzing tuberculosis gene expression data obtained from GEO (Transcript Expression Omnibus) database and developing a classification model to aid tuberculosis diagnosis. A classifier combination of Naïve Bayes (NB), and Support Vector Machine (SVM) was used to develop the classification model. The weighted voting ensemble technique was used to improve the classification model's performance by combining the classification results of the single classifier and selecting the group with the highest vote based on the weights given to the single classifiers. Experimental analysis indicates a performance accuracy of the enhanced ensemble classifier as 0.95, which showed a better performance than the single classifiers, which had 0.92, and 0.87 obtained from SVM and NB, respectively. The developed model can also assist health practitioners in the timely diagnosis of tuberculosis, which would reduce the mortality rate caused by the disease, especially in developing countries.
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spelling pubmed-82924942021-07-22 Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis Osamor, Victor Chukwudi Okezie, Adaugo Fiona Sci Rep Article Tuberculosis has the most considerable death rate among diseases caused by a single micro-organism type. The disease is a significant issue for most third-world countries due to poor diagnosis and treatment potentials. Early diagnosis of tuberculosis is the most effective way of managing the disease in patients to reduce the mortality rate of the infection. Despite several methods that exist in diagnosing tuberculosis, the limitations ranging from the cost in carrying out the test to the time taken to obtain the results have hindered early diagnosis of the disease. This work aims to develop a predictive model that would help in the diagnosis of TB using an extended weighted voting ensemble method. The method used to carry out this research involved analyzing tuberculosis gene expression data obtained from GEO (Transcript Expression Omnibus) database and developing a classification model to aid tuberculosis diagnosis. A classifier combination of Naïve Bayes (NB), and Support Vector Machine (SVM) was used to develop the classification model. The weighted voting ensemble technique was used to improve the classification model's performance by combining the classification results of the single classifier and selecting the group with the highest vote based on the weights given to the single classifiers. Experimental analysis indicates a performance accuracy of the enhanced ensemble classifier as 0.95, which showed a better performance than the single classifiers, which had 0.92, and 0.87 obtained from SVM and NB, respectively. The developed model can also assist health practitioners in the timely diagnosis of tuberculosis, which would reduce the mortality rate caused by the disease, especially in developing countries. Nature Publishing Group UK 2021-07-20 /pmc/articles/PMC8292494/ /pubmed/34285324 http://dx.doi.org/10.1038/s41598-021-94347-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Osamor, Victor Chukwudi
Okezie, Adaugo Fiona
Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis
title Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis
title_full Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis
title_fullStr Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis
title_full_unstemmed Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis
title_short Enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis
title_sort enhancing the weighted voting ensemble algorithm for tuberculosis predictive diagnosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8292494/
https://www.ncbi.nlm.nih.gov/pubmed/34285324
http://dx.doi.org/10.1038/s41598-021-94347-6
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