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Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer

Bladder cancer (BCa) is a common lethal urinary malignancy worldwide. The role of ARHGAP family genes in BCa and its association with immuno-microenvironment remain largely unknown. ARHGAP family expression and immune infiltration in BCa were analyzed by bioinformatics analysis. Then, we investigate...

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Autores principales: Yang, Chen, Wu, Siqi, Mou, Zezhong, Zhou, Quan, Zhang, Zheyu, Chen, Yiling, Ou, Yuxi, Chen, Xinan, Dai, Xiyu, Xu, Chenyang, Liu, Na, Jiang, Haowen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294098/
https://www.ncbi.nlm.nih.gov/pubmed/34307347
http://dx.doi.org/10.3389/fcell.2021.657219
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author Yang, Chen
Wu, Siqi
Mou, Zezhong
Zhou, Quan
Zhang, Zheyu
Chen, Yiling
Ou, Yuxi
Chen, Xinan
Dai, Xiyu
Xu, Chenyang
Liu, Na
Jiang, Haowen
author_facet Yang, Chen
Wu, Siqi
Mou, Zezhong
Zhou, Quan
Zhang, Zheyu
Chen, Yiling
Ou, Yuxi
Chen, Xinan
Dai, Xiyu
Xu, Chenyang
Liu, Na
Jiang, Haowen
author_sort Yang, Chen
collection PubMed
description Bladder cancer (BCa) is a common lethal urinary malignancy worldwide. The role of ARHGAP family genes in BCa and its association with immuno-microenvironment remain largely unknown. ARHGAP family expression and immune infiltration in BCa were analyzed by bioinformatics analysis. Then, we investigated cell proliferation, invasion, and migration in vivo and in vitro of the ARHGAP family. Furthermore, atomic force microscopy (AFM) was employed in measuring cellular mechanical properties of BCa cells. The results demonstrated that ARHGAP family genes correlate with a tumor-promoting microenvironment with a lower Th1/Th2 cell ratio, higher DC cell infiltration, higher Treg cell infiltration, and T-cell exhaustion phenotype. Silencing ARHGAP5, ARHGAP17, and ARHGAP24 suppressed BCa cell proliferation, migration, and metastasis. Knocking down of ARHGAPs in T24 cells caused a relatively higher Young’s modulus and lower adhesive force and cell height. Taken together, ARHGAP family genes promote BCa progressing through establishing a tumor-promoting microenvironment and promoting cancer progression.
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spelling pubmed-82940982021-07-22 Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer Yang, Chen Wu, Siqi Mou, Zezhong Zhou, Quan Zhang, Zheyu Chen, Yiling Ou, Yuxi Chen, Xinan Dai, Xiyu Xu, Chenyang Liu, Na Jiang, Haowen Front Cell Dev Biol Cell and Developmental Biology Bladder cancer (BCa) is a common lethal urinary malignancy worldwide. The role of ARHGAP family genes in BCa and its association with immuno-microenvironment remain largely unknown. ARHGAP family expression and immune infiltration in BCa were analyzed by bioinformatics analysis. Then, we investigated cell proliferation, invasion, and migration in vivo and in vitro of the ARHGAP family. Furthermore, atomic force microscopy (AFM) was employed in measuring cellular mechanical properties of BCa cells. The results demonstrated that ARHGAP family genes correlate with a tumor-promoting microenvironment with a lower Th1/Th2 cell ratio, higher DC cell infiltration, higher Treg cell infiltration, and T-cell exhaustion phenotype. Silencing ARHGAP5, ARHGAP17, and ARHGAP24 suppressed BCa cell proliferation, migration, and metastasis. Knocking down of ARHGAPs in T24 cells caused a relatively higher Young’s modulus and lower adhesive force and cell height. Taken together, ARHGAP family genes promote BCa progressing through establishing a tumor-promoting microenvironment and promoting cancer progression. Frontiers Media S.A. 2021-07-07 /pmc/articles/PMC8294098/ /pubmed/34307347 http://dx.doi.org/10.3389/fcell.2021.657219 Text en Copyright © 2021 Yang, Wu, Mou, Zhou, Zhang, Chen, Ou, Chen, Dai, Xu, Liu and Jiang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Yang, Chen
Wu, Siqi
Mou, Zezhong
Zhou, Quan
Zhang, Zheyu
Chen, Yiling
Ou, Yuxi
Chen, Xinan
Dai, Xiyu
Xu, Chenyang
Liu, Na
Jiang, Haowen
Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer
title Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer
title_full Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer
title_fullStr Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer
title_full_unstemmed Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer
title_short Transcriptomic Analysis Identified ARHGAP Family as a Novel Biomarker Associated With Tumor-Promoting Immune Infiltration and Nanomechanical Characteristics in Bladder Cancer
title_sort transcriptomic analysis identified arhgap family as a novel biomarker associated with tumor-promoting immune infiltration and nanomechanical characteristics in bladder cancer
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294098/
https://www.ncbi.nlm.nih.gov/pubmed/34307347
http://dx.doi.org/10.3389/fcell.2021.657219
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