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Topological network measures for drug repositioning
Drug repositioning has received increased attention since the past decade as several blockbuster drugs have come out of repositioning. Computational approaches are significantly contributing to these efforts, of which, network-based methods play a key role. Various structural (topological) network m...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294518/ https://www.ncbi.nlm.nih.gov/pubmed/33348366 http://dx.doi.org/10.1093/bib/bbaa357 |
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author | Badkas, Apurva De Landtsheer, Sébastien Sauter, Thomas |
author_facet | Badkas, Apurva De Landtsheer, Sébastien Sauter, Thomas |
author_sort | Badkas, Apurva |
collection | PubMed |
description | Drug repositioning has received increased attention since the past decade as several blockbuster drugs have come out of repositioning. Computational approaches are significantly contributing to these efforts, of which, network-based methods play a key role. Various structural (topological) network measures have thereby contributed to uncovering unintuitive functional relationships and repositioning candidates in drug-disease and other networks. This review gives a broad overview of the topic, and offers perspectives on the application of topological measures for network analysis. It also discusses unexplored measures, and draws attention to a wider scope of application efforts, especially in drug repositioning. |
format | Online Article Text |
id | pubmed-8294518 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-82945182021-07-22 Topological network measures for drug repositioning Badkas, Apurva De Landtsheer, Sébastien Sauter, Thomas Brief Bioinform Method Review Drug repositioning has received increased attention since the past decade as several blockbuster drugs have come out of repositioning. Computational approaches are significantly contributing to these efforts, of which, network-based methods play a key role. Various structural (topological) network measures have thereby contributed to uncovering unintuitive functional relationships and repositioning candidates in drug-disease and other networks. This review gives a broad overview of the topic, and offers perspectives on the application of topological measures for network analysis. It also discusses unexplored measures, and draws attention to a wider scope of application efforts, especially in drug repositioning. Oxford University Press 2020-12-22 /pmc/articles/PMC8294518/ /pubmed/33348366 http://dx.doi.org/10.1093/bib/bbaa357 Text en © The Author(s) 2020. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Method Review Badkas, Apurva De Landtsheer, Sébastien Sauter, Thomas Topological network measures for drug repositioning |
title | Topological network measures for drug repositioning |
title_full | Topological network measures for drug repositioning |
title_fullStr | Topological network measures for drug repositioning |
title_full_unstemmed | Topological network measures for drug repositioning |
title_short | Topological network measures for drug repositioning |
title_sort | topological network measures for drug repositioning |
topic | Method Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294518/ https://www.ncbi.nlm.nih.gov/pubmed/33348366 http://dx.doi.org/10.1093/bib/bbaa357 |
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