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Topological network measures for drug repositioning

Drug repositioning has received increased attention since the past decade as several blockbuster drugs have come out of repositioning. Computational approaches are significantly contributing to these efforts, of which, network-based methods play a key role. Various structural (topological) network m...

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Detalles Bibliográficos
Autores principales: Badkas, Apurva, De Landtsheer, Sébastien, Sauter, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294518/
https://www.ncbi.nlm.nih.gov/pubmed/33348366
http://dx.doi.org/10.1093/bib/bbaa357
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author Badkas, Apurva
De Landtsheer, Sébastien
Sauter, Thomas
author_facet Badkas, Apurva
De Landtsheer, Sébastien
Sauter, Thomas
author_sort Badkas, Apurva
collection PubMed
description Drug repositioning has received increased attention since the past decade as several blockbuster drugs have come out of repositioning. Computational approaches are significantly contributing to these efforts, of which, network-based methods play a key role. Various structural (topological) network measures have thereby contributed to uncovering unintuitive functional relationships and repositioning candidates in drug-disease and other networks. This review gives a broad overview of the topic, and offers perspectives on the application of topological measures for network analysis. It also discusses unexplored measures, and draws attention to a wider scope of application efforts, especially in drug repositioning.
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spelling pubmed-82945182021-07-22 Topological network measures for drug repositioning Badkas, Apurva De Landtsheer, Sébastien Sauter, Thomas Brief Bioinform Method Review Drug repositioning has received increased attention since the past decade as several blockbuster drugs have come out of repositioning. Computational approaches are significantly contributing to these efforts, of which, network-based methods play a key role. Various structural (topological) network measures have thereby contributed to uncovering unintuitive functional relationships and repositioning candidates in drug-disease and other networks. This review gives a broad overview of the topic, and offers perspectives on the application of topological measures for network analysis. It also discusses unexplored measures, and draws attention to a wider scope of application efforts, especially in drug repositioning. Oxford University Press 2020-12-22 /pmc/articles/PMC8294518/ /pubmed/33348366 http://dx.doi.org/10.1093/bib/bbaa357 Text en © The Author(s) 2020. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Method Review
Badkas, Apurva
De Landtsheer, Sébastien
Sauter, Thomas
Topological network measures for drug repositioning
title Topological network measures for drug repositioning
title_full Topological network measures for drug repositioning
title_fullStr Topological network measures for drug repositioning
title_full_unstemmed Topological network measures for drug repositioning
title_short Topological network measures for drug repositioning
title_sort topological network measures for drug repositioning
topic Method Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294518/
https://www.ncbi.nlm.nih.gov/pubmed/33348366
http://dx.doi.org/10.1093/bib/bbaa357
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