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Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study

To mitigate the harmful effects of the COVID-19 pandemic, world countries have resorted – though with different timing and intensities – to a range of interventions. These interventions and their relaxation have shaped the epidemic into a multi-phase form, namely an early invasion phase often follow...

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Autores principales: d’Onofrio, Alberto, Manfredi, Piero, Iannelli, Mimmo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294756/
https://www.ncbi.nlm.nih.gov/pubmed/34302820
http://dx.doi.org/10.1016/j.mbs.2021.108671
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author d’Onofrio, Alberto
Manfredi, Piero
Iannelli, Mimmo
author_facet d’Onofrio, Alberto
Manfredi, Piero
Iannelli, Mimmo
author_sort d’Onofrio, Alberto
collection PubMed
description To mitigate the harmful effects of the COVID-19 pandemic, world countries have resorted – though with different timing and intensities – to a range of interventions. These interventions and their relaxation have shaped the epidemic into a multi-phase form, namely an early invasion phase often followed by a lockdown phase, whose unlocking triggered a second epidemic wave, and so on. In this article, we provide a kinematic description of an epidemic whose time course is subdivided by mitigation interventions into a sequence of phases, on the assumption that interventions are effective enough to prevent the susceptible proportion to largely depart from 100% (or from any other relevant level). By applying this hypothesis to a general SIR epidemic model with age-since-infection and piece-wise constant contact and recovery rates, we supply a unified treatment of this multi-phase epidemic showing how the different phases unfold over time. Subsequently, by exploiting a wide class of infectiousness and recovery kernels allowing reducibility (either to ordinary or delayed differential equations), we investigate in depth a low-dimensional case allowing a non-trivial full analytical treatment also of the transient dynamics connecting the different phases of the epidemic. Finally, we illustrate our theoretical results by a fit to the overall Italian COVID-19 epidemic since March 2020 till February 2021 i.e., before the mass vaccination campaign. This show the abilities of the proposed model in effectively describing the entire course of an observed multi-phasic epidemic with a minimal set of data and parameters, and in providing useful insight on a number of aspects including e.g., the inertial phenomena surrounding the switch between different phases.
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spelling pubmed-82947562021-07-22 Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study d’Onofrio, Alberto Manfredi, Piero Iannelli, Mimmo Math Biosci Original Research Article To mitigate the harmful effects of the COVID-19 pandemic, world countries have resorted – though with different timing and intensities – to a range of interventions. These interventions and their relaxation have shaped the epidemic into a multi-phase form, namely an early invasion phase often followed by a lockdown phase, whose unlocking triggered a second epidemic wave, and so on. In this article, we provide a kinematic description of an epidemic whose time course is subdivided by mitigation interventions into a sequence of phases, on the assumption that interventions are effective enough to prevent the susceptible proportion to largely depart from 100% (or from any other relevant level). By applying this hypothesis to a general SIR epidemic model with age-since-infection and piece-wise constant contact and recovery rates, we supply a unified treatment of this multi-phase epidemic showing how the different phases unfold over time. Subsequently, by exploiting a wide class of infectiousness and recovery kernels allowing reducibility (either to ordinary or delayed differential equations), we investigate in depth a low-dimensional case allowing a non-trivial full analytical treatment also of the transient dynamics connecting the different phases of the epidemic. Finally, we illustrate our theoretical results by a fit to the overall Italian COVID-19 epidemic since March 2020 till February 2021 i.e., before the mass vaccination campaign. This show the abilities of the proposed model in effectively describing the entire course of an observed multi-phasic epidemic with a minimal set of data and parameters, and in providing useful insight on a number of aspects including e.g., the inertial phenomena surrounding the switch between different phases. Elsevier Inc. 2021-10 2021-07-21 /pmc/articles/PMC8294756/ /pubmed/34302820 http://dx.doi.org/10.1016/j.mbs.2021.108671 Text en © 2021 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Original Research Article
d’Onofrio, Alberto
Manfredi, Piero
Iannelli, Mimmo
Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study
title Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study
title_full Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study
title_fullStr Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study
title_full_unstemmed Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study
title_short Dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of COVID-19 control in Italy as case study
title_sort dynamics of partially mitigated multi-phasic epidemics at low susceptible depletion: phases of covid-19 control in italy as case study
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294756/
https://www.ncbi.nlm.nih.gov/pubmed/34302820
http://dx.doi.org/10.1016/j.mbs.2021.108671
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