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Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia
AIM: To investigate optochin-resistant viridans group streptococci (VGS) strains isolated from the sputum sample of adult patients with different clinical symptoms. MATERIALS AND METHODS: Optochin-resistant VGS isolates were identified by matrix-assisted laser desorption ionization time of flight ma...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294987/ https://www.ncbi.nlm.nih.gov/pubmed/34335780 http://dx.doi.org/10.1155/2021/6646925 |
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author | Paramaiswari, Wisiva Tofriska Sidik, Nurma Sumar Khoeri, Miftahuddin Majid Tafroji, Wisnu Said, Wahyu Finasari Safari, Dodi |
author_facet | Paramaiswari, Wisiva Tofriska Sidik, Nurma Sumar Khoeri, Miftahuddin Majid Tafroji, Wisnu Said, Wahyu Finasari Safari, Dodi |
author_sort | Paramaiswari, Wisiva Tofriska |
collection | PubMed |
description | AIM: To investigate optochin-resistant viridans group streptococci (VGS) strains isolated from the sputum sample of adult patients with different clinical symptoms. MATERIALS AND METHODS: Optochin-resistant VGS isolates were identified by matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS). recA sequencing was used to confirm identified isolates at the genus level by MALDI-TOF MS. Finding. We identified 79% of tested isolates (148/187) at the species-level identification using the MALDI-TOF MS tool. We identified that the most common species isolated from sputum specimens were S. oralis (44.9%) followed by S. mitis (25.7%), S. infantis (9.1%), S. parasanguinis (7.5%), S. peroris (3.7%), S. anginosus (2.7%), and S. sanguinis (2.1%). Discussion. The S. oralis strains were majority of optochin-resistant VGS isolates obtained from sputum of adult patients in Jakarta, Indonesia. MALDI-TOF MS showed potential for the rapid identification tool to identify optochin-resistant VGS isolates. Although there were discrepancies in identifying isolates at the genus/species level, the performance could be improved by expanding its database. |
format | Online Article Text |
id | pubmed-8294987 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-82949872021-07-31 Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia Paramaiswari, Wisiva Tofriska Sidik, Nurma Sumar Khoeri, Miftahuddin Majid Tafroji, Wisnu Said, Wahyu Finasari Safari, Dodi Int J Microbiol Research Article AIM: To investigate optochin-resistant viridans group streptococci (VGS) strains isolated from the sputum sample of adult patients with different clinical symptoms. MATERIALS AND METHODS: Optochin-resistant VGS isolates were identified by matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS). recA sequencing was used to confirm identified isolates at the genus level by MALDI-TOF MS. Finding. We identified 79% of tested isolates (148/187) at the species-level identification using the MALDI-TOF MS tool. We identified that the most common species isolated from sputum specimens were S. oralis (44.9%) followed by S. mitis (25.7%), S. infantis (9.1%), S. parasanguinis (7.5%), S. peroris (3.7%), S. anginosus (2.7%), and S. sanguinis (2.1%). Discussion. The S. oralis strains were majority of optochin-resistant VGS isolates obtained from sputum of adult patients in Jakarta, Indonesia. MALDI-TOF MS showed potential for the rapid identification tool to identify optochin-resistant VGS isolates. Although there were discrepancies in identifying isolates at the genus/species level, the performance could be improved by expanding its database. Hindawi 2021-07-14 /pmc/articles/PMC8294987/ /pubmed/34335780 http://dx.doi.org/10.1155/2021/6646925 Text en Copyright © 2021 Wisiva Tofriska Paramaiswari et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Paramaiswari, Wisiva Tofriska Sidik, Nurma Sumar Khoeri, Miftahuddin Majid Tafroji, Wisnu Said, Wahyu Finasari Safari, Dodi Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia |
title | Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia |
title_full | Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia |
title_fullStr | Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia |
title_full_unstemmed | Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia |
title_short | Isolation and Identification of Optochin-Resistant Viridans Group Streptococci from the Sputum Samples of Adult Patients in Jakarta, Indonesia |
title_sort | isolation and identification of optochin-resistant viridans group streptococci from the sputum samples of adult patients in jakarta, indonesia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8294987/ https://www.ncbi.nlm.nih.gov/pubmed/34335780 http://dx.doi.org/10.1155/2021/6646925 |
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