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Optimizing testing for COVID-19 in India

COVID-19 testing across India uses a mix of two types of tests. Rapid Antigen Tests (RATs) are relatively inexpensive point-of-care lateral-flow-assay tests, but they are also less sensitive. The reverse-transcriptase polymerase-chain-reaction (RT-PCR) test has close to 100% sensitivity and specific...

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Autores principales: Cherian, Philip, Krishna, Sandeep, Menon, Gautam I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8297905/
https://www.ncbi.nlm.nih.gov/pubmed/34292931
http://dx.doi.org/10.1371/journal.pcbi.1009126
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author Cherian, Philip
Krishna, Sandeep
Menon, Gautam I.
author_facet Cherian, Philip
Krishna, Sandeep
Menon, Gautam I.
author_sort Cherian, Philip
collection PubMed
description COVID-19 testing across India uses a mix of two types of tests. Rapid Antigen Tests (RATs) are relatively inexpensive point-of-care lateral-flow-assay tests, but they are also less sensitive. The reverse-transcriptase polymerase-chain-reaction (RT-PCR) test has close to 100% sensitivity and specificity in a laboratory setting, but delays in returning results, as well as increased costs relative to RATs, may vitiate this advantage. India-wide, about 49% of COVID-19 tests are RATs, but some Indian states, including the large states of Uttar Pradesh (pop. 227.9 million) and Bihar (pop. 121.3 million) use a much higher proportion of such tests. Here we show, using simulations based on epidemiological network models, that the judicious use of RATs can yield epidemiological outcomes comparable to those obtained through RT-PCR-based testing and isolation of positives, provided a few conditions are met. These are (a) that RAT test sensitivity is not too low, (b) that a reasonably large fraction of the population, of order 0.5% per day, can be tested, (c) that those testing positive are isolated for a sufficient duration, and that (d) testing is accompanied by other non-pharmaceutical interventions for increased effectiveness. We assess optimal testing regimes, taking into account test sensitivity and specificity, background seroprevalence and current test pricing. We find, surprisingly, that even 100% RAT test regimes should be acceptable, from both an epidemiological as well as a economic standpoint, provided the conditions outlined above are met.
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spelling pubmed-82979052021-07-31 Optimizing testing for COVID-19 in India Cherian, Philip Krishna, Sandeep Menon, Gautam I. PLoS Comput Biol Research Article COVID-19 testing across India uses a mix of two types of tests. Rapid Antigen Tests (RATs) are relatively inexpensive point-of-care lateral-flow-assay tests, but they are also less sensitive. The reverse-transcriptase polymerase-chain-reaction (RT-PCR) test has close to 100% sensitivity and specificity in a laboratory setting, but delays in returning results, as well as increased costs relative to RATs, may vitiate this advantage. India-wide, about 49% of COVID-19 tests are RATs, but some Indian states, including the large states of Uttar Pradesh (pop. 227.9 million) and Bihar (pop. 121.3 million) use a much higher proportion of such tests. Here we show, using simulations based on epidemiological network models, that the judicious use of RATs can yield epidemiological outcomes comparable to those obtained through RT-PCR-based testing and isolation of positives, provided a few conditions are met. These are (a) that RAT test sensitivity is not too low, (b) that a reasonably large fraction of the population, of order 0.5% per day, can be tested, (c) that those testing positive are isolated for a sufficient duration, and that (d) testing is accompanied by other non-pharmaceutical interventions for increased effectiveness. We assess optimal testing regimes, taking into account test sensitivity and specificity, background seroprevalence and current test pricing. We find, surprisingly, that even 100% RAT test regimes should be acceptable, from both an epidemiological as well as a economic standpoint, provided the conditions outlined above are met. Public Library of Science 2021-07-22 /pmc/articles/PMC8297905/ /pubmed/34292931 http://dx.doi.org/10.1371/journal.pcbi.1009126 Text en © 2021 Cherian et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cherian, Philip
Krishna, Sandeep
Menon, Gautam I.
Optimizing testing for COVID-19 in India
title Optimizing testing for COVID-19 in India
title_full Optimizing testing for COVID-19 in India
title_fullStr Optimizing testing for COVID-19 in India
title_full_unstemmed Optimizing testing for COVID-19 in India
title_short Optimizing testing for COVID-19 in India
title_sort optimizing testing for covid-19 in india
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8297905/
https://www.ncbi.nlm.nih.gov/pubmed/34292931
http://dx.doi.org/10.1371/journal.pcbi.1009126
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