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Predicting seasonal influenza using supermarket retail records

Increased availability of epidemiological data, novel digital data streams, and the rise of powerful machine learning approaches have generated a surge of research activity on real-time epidemic forecast systems. In this paper, we propose the use of a novel data source, namely retail market data to...

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Autores principales: Miliou, Ioanna, Xiong, Xinyue, Rinzivillo, Salvatore, Zhang, Qian, Rossetti, Giulio, Giannotti, Fosca, Pedreschi, Dino, Vespignani, Alessandro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8297944/
https://www.ncbi.nlm.nih.gov/pubmed/34252075
http://dx.doi.org/10.1371/journal.pcbi.1009087
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author Miliou, Ioanna
Xiong, Xinyue
Rinzivillo, Salvatore
Zhang, Qian
Rossetti, Giulio
Giannotti, Fosca
Pedreschi, Dino
Vespignani, Alessandro
author_facet Miliou, Ioanna
Xiong, Xinyue
Rinzivillo, Salvatore
Zhang, Qian
Rossetti, Giulio
Giannotti, Fosca
Pedreschi, Dino
Vespignani, Alessandro
author_sort Miliou, Ioanna
collection PubMed
description Increased availability of epidemiological data, novel digital data streams, and the rise of powerful machine learning approaches have generated a surge of research activity on real-time epidemic forecast systems. In this paper, we propose the use of a novel data source, namely retail market data to improve seasonal influenza forecasting. Specifically, we consider supermarket retail data as a proxy signal for influenza, through the identification of sentinel baskets, i.e., products bought together by a population of selected customers. We develop a nowcasting and forecasting framework that provides estimates for influenza incidence in Italy up to 4 weeks ahead. We make use of the Support Vector Regression (SVR) model to produce the predictions of seasonal flu incidence. Our predictions outperform both a baseline autoregressive model and a second baseline based on product purchases. The results show quantitatively the value of incorporating retail market data in forecasting models, acting as a proxy that can be used for the real-time analysis of epidemics.
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spelling pubmed-82979442021-07-31 Predicting seasonal influenza using supermarket retail records Miliou, Ioanna Xiong, Xinyue Rinzivillo, Salvatore Zhang, Qian Rossetti, Giulio Giannotti, Fosca Pedreschi, Dino Vespignani, Alessandro PLoS Comput Biol Research Article Increased availability of epidemiological data, novel digital data streams, and the rise of powerful machine learning approaches have generated a surge of research activity on real-time epidemic forecast systems. In this paper, we propose the use of a novel data source, namely retail market data to improve seasonal influenza forecasting. Specifically, we consider supermarket retail data as a proxy signal for influenza, through the identification of sentinel baskets, i.e., products bought together by a population of selected customers. We develop a nowcasting and forecasting framework that provides estimates for influenza incidence in Italy up to 4 weeks ahead. We make use of the Support Vector Regression (SVR) model to produce the predictions of seasonal flu incidence. Our predictions outperform both a baseline autoregressive model and a second baseline based on product purchases. The results show quantitatively the value of incorporating retail market data in forecasting models, acting as a proxy that can be used for the real-time analysis of epidemics. Public Library of Science 2021-07-12 /pmc/articles/PMC8297944/ /pubmed/34252075 http://dx.doi.org/10.1371/journal.pcbi.1009087 Text en © 2021 Miliou et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Miliou, Ioanna
Xiong, Xinyue
Rinzivillo, Salvatore
Zhang, Qian
Rossetti, Giulio
Giannotti, Fosca
Pedreschi, Dino
Vespignani, Alessandro
Predicting seasonal influenza using supermarket retail records
title Predicting seasonal influenza using supermarket retail records
title_full Predicting seasonal influenza using supermarket retail records
title_fullStr Predicting seasonal influenza using supermarket retail records
title_full_unstemmed Predicting seasonal influenza using supermarket retail records
title_short Predicting seasonal influenza using supermarket retail records
title_sort predicting seasonal influenza using supermarket retail records
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8297944/
https://www.ncbi.nlm.nih.gov/pubmed/34252075
http://dx.doi.org/10.1371/journal.pcbi.1009087
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