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Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma
Hepatocellular carcinoma (HCC) is one of the most common types of cancer, which is associated with a poor prognosis. It is necessary to identify novel prognostic biomarkers and therapeutic targets to improve the survival of patients with HCC. In the present study, a seven-gene signature associated w...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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D.A. Spandidos
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8299194/ https://www.ncbi.nlm.nih.gov/pubmed/34278494 http://dx.doi.org/10.3892/mmr.2021.12289 |
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author | Zhan, Ke Bai, Yang Liao, Shengtao Chen, Hongyu Kuang, Lili Luo, Qingqing Lv, Lin Qiu, Liewang Mei, Zhechuan |
author_facet | Zhan, Ke Bai, Yang Liao, Shengtao Chen, Hongyu Kuang, Lili Luo, Qingqing Lv, Lin Qiu, Liewang Mei, Zhechuan |
author_sort | Zhan, Ke |
collection | PubMed |
description | Hepatocellular carcinoma (HCC) is one of the most common types of cancer, which is associated with a poor prognosis. It is necessary to identify novel prognostic biomarkers and therapeutic targets to improve the survival of patients with HCC. In the present study, a seven-gene signature associated with HCC progression was identified using weighted gene co-expression network analysis and least absolute shrinkage and selection operator, and its prognostic prediction value was confirmed in The Cancer Genome Atlas-liver HCC and International Cancer Genome Consortium liver cancer-RIKEN, Japan cohorts. Subsequently, a rarely reported gene, epoxide hydrolase 2 (EPHX2), was selected for further validation. Downregulation of EPHX2 in HCC was revealed using multiple expression datasets. Furthermore, reduced expression of EPHX2 was confirmed in HCC tissue samples and cell lines using reverse transcription-quantitative polymerase chain reaction and western blotting. Additionally, Kaplan-Meier survival curves indicated that patients with higher EPHX2 expression exhibited better prognosis, and clinicopathological analysis also revealed elevated EPHX2 levels in patients with early-stage HCC. Notably, EPHX2 was identified as an independent prognostic biomarker for overall survival of patients with HCC. Gene Ontology analysis, Kyoto Encyclopedia of Genes and Genomes analysis and gene set enrichment analysis were performed to elucidate the functions of EPHX2. The results suggested that EPHX2 expression was closely associated with metabolic reprogramming. Finally, the prognostic value of EPHX2 was evaluated using HCC tissue microarrays. In conclusion, downregulation of EPHX2 was significantly associated with the development of HCC; therefore, EPHX2 may be considered a putative therapeutic candidate for the targeted treatment of HCC. |
format | Online Article Text |
id | pubmed-8299194 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-82991942021-08-11 Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma Zhan, Ke Bai, Yang Liao, Shengtao Chen, Hongyu Kuang, Lili Luo, Qingqing Lv, Lin Qiu, Liewang Mei, Zhechuan Mol Med Rep Articles Hepatocellular carcinoma (HCC) is one of the most common types of cancer, which is associated with a poor prognosis. It is necessary to identify novel prognostic biomarkers and therapeutic targets to improve the survival of patients with HCC. In the present study, a seven-gene signature associated with HCC progression was identified using weighted gene co-expression network analysis and least absolute shrinkage and selection operator, and its prognostic prediction value was confirmed in The Cancer Genome Atlas-liver HCC and International Cancer Genome Consortium liver cancer-RIKEN, Japan cohorts. Subsequently, a rarely reported gene, epoxide hydrolase 2 (EPHX2), was selected for further validation. Downregulation of EPHX2 in HCC was revealed using multiple expression datasets. Furthermore, reduced expression of EPHX2 was confirmed in HCC tissue samples and cell lines using reverse transcription-quantitative polymerase chain reaction and western blotting. Additionally, Kaplan-Meier survival curves indicated that patients with higher EPHX2 expression exhibited better prognosis, and clinicopathological analysis also revealed elevated EPHX2 levels in patients with early-stage HCC. Notably, EPHX2 was identified as an independent prognostic biomarker for overall survival of patients with HCC. Gene Ontology analysis, Kyoto Encyclopedia of Genes and Genomes analysis and gene set enrichment analysis were performed to elucidate the functions of EPHX2. The results suggested that EPHX2 expression was closely associated with metabolic reprogramming. Finally, the prognostic value of EPHX2 was evaluated using HCC tissue microarrays. In conclusion, downregulation of EPHX2 was significantly associated with the development of HCC; therefore, EPHX2 may be considered a putative therapeutic candidate for the targeted treatment of HCC. D.A. Spandidos 2021-09 2021-07-13 /pmc/articles/PMC8299194/ /pubmed/34278494 http://dx.doi.org/10.3892/mmr.2021.12289 Text en Copyright: © Zhan et al. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Zhan, Ke Bai, Yang Liao, Shengtao Chen, Hongyu Kuang, Lili Luo, Qingqing Lv, Lin Qiu, Liewang Mei, Zhechuan Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma |
title | Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma |
title_full | Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma |
title_fullStr | Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma |
title_full_unstemmed | Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma |
title_short | Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma |
title_sort | identification and validation of ephx2 as a prognostic biomarker in hepatocellular carcinoma |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8299194/ https://www.ncbi.nlm.nih.gov/pubmed/34278494 http://dx.doi.org/10.3892/mmr.2021.12289 |
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