Cargando…

Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer

Colorectal cancer (CRC) is one of the most common cancers. Almost 80% of CRC cases are colon adenocarcinomas (COADs). Several studies have indicated the role of immunotherapy in the treatment of various cancers. Our study aimed to identify immune-related long non-coding RNAs (lncRNAs) and to use the...

Descripción completa

Detalles Bibliográficos
Autores principales: Xing, Xiao-Liang, Zhang, Ti, Yao, Zhi-Yong, Xing, Chaoqun, Wang, Chunxiao, Liu, Yuan-Wu, Huang, Minjiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8299306/
https://www.ncbi.nlm.nih.gov/pubmed/34306030
http://dx.doi.org/10.3389/fgene.2021.690053
_version_ 1783726243784425472
author Xing, Xiao-Liang
Zhang, Ti
Yao, Zhi-Yong
Xing, Chaoqun
Wang, Chunxiao
Liu, Yuan-Wu
Huang, Minjiang
author_facet Xing, Xiao-Liang
Zhang, Ti
Yao, Zhi-Yong
Xing, Chaoqun
Wang, Chunxiao
Liu, Yuan-Wu
Huang, Minjiang
author_sort Xing, Xiao-Liang
collection PubMed
description Colorectal cancer (CRC) is one of the most common cancers. Almost 80% of CRC cases are colon adenocarcinomas (COADs). Several studies have indicated the role of immunotherapy in the treatment of various cancers. Our study aimed to identify immune-related long non-coding RNAs (lncRNAs) and to use them to construct a risk assessment model for evaluating COAD prognosis. Using differential expression, correlation, and Cox regression analyses, we identified three immune-related differentially expressed lncRNAs (IR-DELs) and used them to construct a risk assessment model. The area under the curve (AUC) for each receiver operating characteristic (ROC) curve at 3-, 5-, and 10-years were greater than 0.6. In addition, the risk assessment model was correlated with several immune cells and factors. The three IR-DELs (AC124067.4, LINC02604, and MIR4435-2HG) identified in this study can be used to predict outcomes for patients with COAD and might help in identifying those who can benefit from anti-tumor immunotherapy.
format Online
Article
Text
id pubmed-8299306
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-82993062021-07-24 Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer Xing, Xiao-Liang Zhang, Ti Yao, Zhi-Yong Xing, Chaoqun Wang, Chunxiao Liu, Yuan-Wu Huang, Minjiang Front Genet Genetics Colorectal cancer (CRC) is one of the most common cancers. Almost 80% of CRC cases are colon adenocarcinomas (COADs). Several studies have indicated the role of immunotherapy in the treatment of various cancers. Our study aimed to identify immune-related long non-coding RNAs (lncRNAs) and to use them to construct a risk assessment model for evaluating COAD prognosis. Using differential expression, correlation, and Cox regression analyses, we identified three immune-related differentially expressed lncRNAs (IR-DELs) and used them to construct a risk assessment model. The area under the curve (AUC) for each receiver operating characteristic (ROC) curve at 3-, 5-, and 10-years were greater than 0.6. In addition, the risk assessment model was correlated with several immune cells and factors. The three IR-DELs (AC124067.4, LINC02604, and MIR4435-2HG) identified in this study can be used to predict outcomes for patients with COAD and might help in identifying those who can benefit from anti-tumor immunotherapy. Frontiers Media S.A. 2021-07-09 /pmc/articles/PMC8299306/ /pubmed/34306030 http://dx.doi.org/10.3389/fgene.2021.690053 Text en Copyright © 2021 Xing, Zhang, Yao, Xing, Wang, Liu and Huang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Xing, Xiao-Liang
Zhang, Ti
Yao, Zhi-Yong
Xing, Chaoqun
Wang, Chunxiao
Liu, Yuan-Wu
Huang, Minjiang
Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer
title Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer
title_full Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer
title_fullStr Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer
title_full_unstemmed Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer
title_short Immune-Related Gene Expression Analysis Revealed Three lncRNAs as Prognostic Factors for Colon Cancer
title_sort immune-related gene expression analysis revealed three lncrnas as prognostic factors for colon cancer
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8299306/
https://www.ncbi.nlm.nih.gov/pubmed/34306030
http://dx.doi.org/10.3389/fgene.2021.690053
work_keys_str_mv AT xingxiaoliang immunerelatedgeneexpressionanalysisrevealedthreelncrnasasprognosticfactorsforcoloncancer
AT zhangti immunerelatedgeneexpressionanalysisrevealedthreelncrnasasprognosticfactorsforcoloncancer
AT yaozhiyong immunerelatedgeneexpressionanalysisrevealedthreelncrnasasprognosticfactorsforcoloncancer
AT xingchaoqun immunerelatedgeneexpressionanalysisrevealedthreelncrnasasprognosticfactorsforcoloncancer
AT wangchunxiao immunerelatedgeneexpressionanalysisrevealedthreelncrnasasprognosticfactorsforcoloncancer
AT liuyuanwu immunerelatedgeneexpressionanalysisrevealedthreelncrnasasprognosticfactorsforcoloncancer
AT huangminjiang immunerelatedgeneexpressionanalysisrevealedthreelncrnasasprognosticfactorsforcoloncancer