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High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance

Drought is one of the most severe and unpredictable abiotic stresses, occurring at any growth stage and affecting crop yields worldwide. Therefore, it is essential to develop drought tolerant varieties to ensure sustainable crop production in an ever-changing climate. High-throughput digital phenoty...

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Autores principales: Joshi, Sameer, Thoday-Kennedy, Emily, Daetwyler, Hans D., Hayden, Matthew, Spangenberg, German, Kant, Surya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8301646/
https://www.ncbi.nlm.nih.gov/pubmed/34297757
http://dx.doi.org/10.1371/journal.pone.0254908
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author Joshi, Sameer
Thoday-Kennedy, Emily
Daetwyler, Hans D.
Hayden, Matthew
Spangenberg, German
Kant, Surya
author_facet Joshi, Sameer
Thoday-Kennedy, Emily
Daetwyler, Hans D.
Hayden, Matthew
Spangenberg, German
Kant, Surya
author_sort Joshi, Sameer
collection PubMed
description Drought is one of the most severe and unpredictable abiotic stresses, occurring at any growth stage and affecting crop yields worldwide. Therefore, it is essential to develop drought tolerant varieties to ensure sustainable crop production in an ever-changing climate. High-throughput digital phenotyping technologies in tandem with robust screening methods enable precise and faster selection of genotypes for breeding. To investigate the use of digital imaging to reliably phenotype for drought tolerance, a genetically diverse safflower population was screened under different drought stresses at Agriculture Victoria’s high-throughput, automated phenotyping platform, Plant Phenomics Victoria, Horsham. In the first experiment, four treatments, control (90% field capacity; FC), 40% FC at initial branching, 40% FC at flowering and 50% FC at initial branching and flowering, were applied to assess the performance of four safflower genotypes. Based on these results, drought stress using 50% FC at initial branching and flowering stages was chosen to further screen 200 diverse safflower genotypes. Measured plant traits and dry biomass showed high correlations with derived digital traits including estimated shoot biomass, convex hull area, caliper length and minimum area rectangle, indicating the viability of using digital traits as proxy measures for plant growth. Estimated shoot biomass showed close association having moderately high correlation with drought indices yield index, stress tolerance index, geometric mean productivity, and mean productivity. Diverse genotypes were classified into four clusters of drought tolerance based on their performance (seed yield and digitally estimated shoot biomass) under stress. Overall, results show that rapid and precise image-based, high-throughput phenotyping in controlled environments can be used to effectively differentiate response to drought stress in a large numbers of safflower genotypes.
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spelling pubmed-83016462021-07-31 High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance Joshi, Sameer Thoday-Kennedy, Emily Daetwyler, Hans D. Hayden, Matthew Spangenberg, German Kant, Surya PLoS One Research Article Drought is one of the most severe and unpredictable abiotic stresses, occurring at any growth stage and affecting crop yields worldwide. Therefore, it is essential to develop drought tolerant varieties to ensure sustainable crop production in an ever-changing climate. High-throughput digital phenotyping technologies in tandem with robust screening methods enable precise and faster selection of genotypes for breeding. To investigate the use of digital imaging to reliably phenotype for drought tolerance, a genetically diverse safflower population was screened under different drought stresses at Agriculture Victoria’s high-throughput, automated phenotyping platform, Plant Phenomics Victoria, Horsham. In the first experiment, four treatments, control (90% field capacity; FC), 40% FC at initial branching, 40% FC at flowering and 50% FC at initial branching and flowering, were applied to assess the performance of four safflower genotypes. Based on these results, drought stress using 50% FC at initial branching and flowering stages was chosen to further screen 200 diverse safflower genotypes. Measured plant traits and dry biomass showed high correlations with derived digital traits including estimated shoot biomass, convex hull area, caliper length and minimum area rectangle, indicating the viability of using digital traits as proxy measures for plant growth. Estimated shoot biomass showed close association having moderately high correlation with drought indices yield index, stress tolerance index, geometric mean productivity, and mean productivity. Diverse genotypes were classified into four clusters of drought tolerance based on their performance (seed yield and digitally estimated shoot biomass) under stress. Overall, results show that rapid and precise image-based, high-throughput phenotyping in controlled environments can be used to effectively differentiate response to drought stress in a large numbers of safflower genotypes. Public Library of Science 2021-07-23 /pmc/articles/PMC8301646/ /pubmed/34297757 http://dx.doi.org/10.1371/journal.pone.0254908 Text en © 2021 Joshi et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Joshi, Sameer
Thoday-Kennedy, Emily
Daetwyler, Hans D.
Hayden, Matthew
Spangenberg, German
Kant, Surya
High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance
title High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance
title_full High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance
title_fullStr High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance
title_full_unstemmed High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance
title_short High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance
title_sort high-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8301646/
https://www.ncbi.nlm.nih.gov/pubmed/34297757
http://dx.doi.org/10.1371/journal.pone.0254908
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