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Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19
Early diagnosis of pandemic diseases such as COVID-19 can prove beneficial in dealing with difficult situations and helping radiologists and other experts manage staffing more effectively. The application of deep learning techniques for genetics, microscopy, and drug discovery has created a global i...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8302400/ https://www.ncbi.nlm.nih.gov/pubmed/34326978 http://dx.doi.org/10.1155/2021/6668985 |
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author | Jha, Nishant Prashar, Deepak Rashid, Mamoon Shafiq, Mohammad Khan, Razaullah Pruncu, Catalin I. Tabrez Siddiqui, Shams Saravana Kumar, M. |
author_facet | Jha, Nishant Prashar, Deepak Rashid, Mamoon Shafiq, Mohammad Khan, Razaullah Pruncu, Catalin I. Tabrez Siddiqui, Shams Saravana Kumar, M. |
author_sort | Jha, Nishant |
collection | PubMed |
description | Early diagnosis of pandemic diseases such as COVID-19 can prove beneficial in dealing with difficult situations and helping radiologists and other experts manage staffing more effectively. The application of deep learning techniques for genetics, microscopy, and drug discovery has created a global impact. It can enhance and speed up the process of medical research and development of vaccines, which is required for pandemics such as COVID-19. However, current drugs such as remdesivir and clinical trials of other chemical compounds have not shown many impressive results. Therefore, it can take more time to provide effective treatment or drugs. In this paper, a deep learning approach based on logistic regression, SVM, Random Forest, and QSAR modeling is suggested. QSAR modeling is done to find the drug targets with protein interaction along with the calculation of binding affinities. Then deep learning models were used for training the molecular descriptor dataset for the robust discovery of drugs and feature extraction for combating COVID-19. Results have shown more significant binding affinities (greater than −18) for many molecules that can be used to block the multiplication of SARS-CoV-2, responsible for COVID-19. |
format | Online Article Text |
id | pubmed-8302400 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-83024002021-07-28 Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19 Jha, Nishant Prashar, Deepak Rashid, Mamoon Shafiq, Mohammad Khan, Razaullah Pruncu, Catalin I. Tabrez Siddiqui, Shams Saravana Kumar, M. J Healthc Eng Research Article Early diagnosis of pandemic diseases such as COVID-19 can prove beneficial in dealing with difficult situations and helping radiologists and other experts manage staffing more effectively. The application of deep learning techniques for genetics, microscopy, and drug discovery has created a global impact. It can enhance and speed up the process of medical research and development of vaccines, which is required for pandemics such as COVID-19. However, current drugs such as remdesivir and clinical trials of other chemical compounds have not shown many impressive results. Therefore, it can take more time to provide effective treatment or drugs. In this paper, a deep learning approach based on logistic regression, SVM, Random Forest, and QSAR modeling is suggested. QSAR modeling is done to find the drug targets with protein interaction along with the calculation of binding affinities. Then deep learning models were used for training the molecular descriptor dataset for the robust discovery of drugs and feature extraction for combating COVID-19. Results have shown more significant binding affinities (greater than −18) for many molecules that can be used to block the multiplication of SARS-CoV-2, responsible for COVID-19. Hindawi 2021-07-20 /pmc/articles/PMC8302400/ /pubmed/34326978 http://dx.doi.org/10.1155/2021/6668985 Text en Copyright © 2021 Nishant Jha et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Jha, Nishant Prashar, Deepak Rashid, Mamoon Shafiq, Mohammad Khan, Razaullah Pruncu, Catalin I. Tabrez Siddiqui, Shams Saravana Kumar, M. Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19 |
title | Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19 |
title_full | Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19 |
title_fullStr | Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19 |
title_full_unstemmed | Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19 |
title_short | Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19 |
title_sort | deep learning approach for discovery of in silico drugs for combating covid-19 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8302400/ https://www.ncbi.nlm.nih.gov/pubmed/34326978 http://dx.doi.org/10.1155/2021/6668985 |
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