Cargando…

The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron

Similar to classical asphericity shifts, aspherical deformations of the electron density in the atomic core region can result in core asphericity shifts in refinements using a Hansen-Coppens multipolar model (HCM), especially when highly precise experimental datasets with resolutions far beyond sin(...

Descripción completa

Detalles Bibliográficos
Autores principales: Fischer, Andreas, Eickerling, Georg, Scherer, Wolfgang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8303496/
https://www.ncbi.nlm.nih.gov/pubmed/34299544
http://dx.doi.org/10.3390/molecules26144270
_version_ 1783727101656956928
author Fischer, Andreas
Eickerling, Georg
Scherer, Wolfgang
author_facet Fischer, Andreas
Eickerling, Georg
Scherer, Wolfgang
author_sort Fischer, Andreas
collection PubMed
description Similar to classical asphericity shifts, aspherical deformations of the electron density in the atomic core region can result in core asphericity shifts in refinements using a Hansen-Coppens multipolar model (HCM), especially when highly precise experimental datasets with resolutions far beyond sin(θ)/λ ≤ 1.0 Å(−1) are employed. These shifts are about two orders of magnitude smaller than their counterparts caused by valence shell deformations, and their underlying deformations are mainly of dipolar character for 1st row atoms. Here, we analyze the resolution dependence of core asphericity shifts in α-boron. Based on theoretical structure factors, an appropriate Extended HCM (EHCM) is developed, which is tested against experimental high-resolution (sin(θ)/λ ≤ 1.6 Å(−1)) single-crystal diffraction data. Bond length deviations due to core asphericity shifts of α-boron in the order of 4–6·10(−4) Å are small but significant at this resolution and can be effectively compensated by an EHCM, although the correlation of the additional model parameters with positional parameters prevented a free refinement of all core model parameters. For high quality, high resolution data, a proper treatment with an EHCM or other equivalent methods is therefore highly recommended.
format Online
Article
Text
id pubmed-8303496
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-83034962021-07-25 The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron Fischer, Andreas Eickerling, Georg Scherer, Wolfgang Molecules Article Similar to classical asphericity shifts, aspherical deformations of the electron density in the atomic core region can result in core asphericity shifts in refinements using a Hansen-Coppens multipolar model (HCM), especially when highly precise experimental datasets with resolutions far beyond sin(θ)/λ ≤ 1.0 Å(−1) are employed. These shifts are about two orders of magnitude smaller than their counterparts caused by valence shell deformations, and their underlying deformations are mainly of dipolar character for 1st row atoms. Here, we analyze the resolution dependence of core asphericity shifts in α-boron. Based on theoretical structure factors, an appropriate Extended HCM (EHCM) is developed, which is tested against experimental high-resolution (sin(θ)/λ ≤ 1.6 Å(−1)) single-crystal diffraction data. Bond length deviations due to core asphericity shifts of α-boron in the order of 4–6·10(−4) Å are small but significant at this resolution and can be effectively compensated by an EHCM, although the correlation of the additional model parameters with positional parameters prevented a free refinement of all core model parameters. For high quality, high resolution data, a proper treatment with an EHCM or other equivalent methods is therefore highly recommended. MDPI 2021-07-14 /pmc/articles/PMC8303496/ /pubmed/34299544 http://dx.doi.org/10.3390/molecules26144270 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fischer, Andreas
Eickerling, Georg
Scherer, Wolfgang
The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron
title The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron
title_full The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron
title_fullStr The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron
title_full_unstemmed The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron
title_short The Effects of Chemical Bonding at Subatomic Resolution: A Case Study on α-Boron
title_sort effects of chemical bonding at subatomic resolution: a case study on α-boron
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8303496/
https://www.ncbi.nlm.nih.gov/pubmed/34299544
http://dx.doi.org/10.3390/molecules26144270
work_keys_str_mv AT fischerandreas theeffectsofchemicalbondingatsubatomicresolutionacasestudyonaboron
AT eickerlinggeorg theeffectsofchemicalbondingatsubatomicresolutionacasestudyonaboron
AT schererwolfgang theeffectsofchemicalbondingatsubatomicresolutionacasestudyonaboron
AT fischerandreas effectsofchemicalbondingatsubatomicresolutionacasestudyonaboron
AT eickerlinggeorg effectsofchemicalbondingatsubatomicresolutionacasestudyonaboron
AT schererwolfgang effectsofchemicalbondingatsubatomicresolutionacasestudyonaboron