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Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments
We showcase the combination of experimental neutron scattering data and molecular dynamics (MD) simulations for exemplary phospholipid membrane systems. Neutron and X-ray reflectometry and small-angle scattering measurements are determined by the scattering length density profile in real space, but...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8304056/ https://www.ncbi.nlm.nih.gov/pubmed/34357157 http://dx.doi.org/10.3390/membranes11070507 |
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author | Zec, Nebojša Mangiapia, Gaetano Hendry, Alex C. Barker, Robert Koutsioubas, Alexandros Frielinghaus, Henrich Campana, Mario Ortega-Roldan, José Luis Busch, Sebastian Moulin, Jean-François |
author_facet | Zec, Nebojša Mangiapia, Gaetano Hendry, Alex C. Barker, Robert Koutsioubas, Alexandros Frielinghaus, Henrich Campana, Mario Ortega-Roldan, José Luis Busch, Sebastian Moulin, Jean-François |
author_sort | Zec, Nebojša |
collection | PubMed |
description | We showcase the combination of experimental neutron scattering data and molecular dynamics (MD) simulations for exemplary phospholipid membrane systems. Neutron and X-ray reflectometry and small-angle scattering measurements are determined by the scattering length density profile in real space, but it is not usually possible to retrieve this profile unambiguously from the data alone. MD simulations predict these density profiles, but they require experimental control. Both issues can be addressed simultaneously by cross-validating scattering data and MD results. The strengths and weaknesses of each technique are discussed in detail with the aim of optimizing the opportunities provided by this combination. |
format | Online Article Text |
id | pubmed-8304056 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-83040562021-07-25 Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments Zec, Nebojša Mangiapia, Gaetano Hendry, Alex C. Barker, Robert Koutsioubas, Alexandros Frielinghaus, Henrich Campana, Mario Ortega-Roldan, José Luis Busch, Sebastian Moulin, Jean-François Membranes (Basel) Article We showcase the combination of experimental neutron scattering data and molecular dynamics (MD) simulations for exemplary phospholipid membrane systems. Neutron and X-ray reflectometry and small-angle scattering measurements are determined by the scattering length density profile in real space, but it is not usually possible to retrieve this profile unambiguously from the data alone. MD simulations predict these density profiles, but they require experimental control. Both issues can be addressed simultaneously by cross-validating scattering data and MD results. The strengths and weaknesses of each technique are discussed in detail with the aim of optimizing the opportunities provided by this combination. MDPI 2021-07-05 /pmc/articles/PMC8304056/ /pubmed/34357157 http://dx.doi.org/10.3390/membranes11070507 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zec, Nebojša Mangiapia, Gaetano Hendry, Alex C. Barker, Robert Koutsioubas, Alexandros Frielinghaus, Henrich Campana, Mario Ortega-Roldan, José Luis Busch, Sebastian Moulin, Jean-François Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments |
title | Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments |
title_full | Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments |
title_fullStr | Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments |
title_full_unstemmed | Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments |
title_short | Mutually Beneficial Combination of Molecular Dynamics Computer Simulations and Scattering Experiments |
title_sort | mutually beneficial combination of molecular dynamics computer simulations and scattering experiments |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8304056/ https://www.ncbi.nlm.nih.gov/pubmed/34357157 http://dx.doi.org/10.3390/membranes11070507 |
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