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Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications

SIMPLE SUMMARY: Filchnerella belongs to Insecta, Orthoptera and Pamphagidae, of which there are 19 recorded species. The wings of Filchnerella are diverse, including three grasshopper wing types: longipennate, short wings and small wings. The previous studies of Filchnerella are more about the descr...

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Autores principales: Zheng, Fang-Yuan, Shi, Qiu-Yue, Ling, Yao, Chen, Jian-Yu, Zhang, Bo-Fan, Li, Xin-Jiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8307104/
https://www.ncbi.nlm.nih.gov/pubmed/34357265
http://dx.doi.org/10.3390/insects12070605
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author Zheng, Fang-Yuan
Shi, Qiu-Yue
Ling, Yao
Chen, Jian-Yu
Zhang, Bo-Fan
Li, Xin-Jiang
author_facet Zheng, Fang-Yuan
Shi, Qiu-Yue
Ling, Yao
Chen, Jian-Yu
Zhang, Bo-Fan
Li, Xin-Jiang
author_sort Zheng, Fang-Yuan
collection PubMed
description SIMPLE SUMMARY: Filchnerella belongs to Insecta, Orthoptera and Pamphagidae, of which there are 19 recorded species. The wings of Filchnerella are diverse, including three grasshopper wing types: longipennate, short wings and small wings. The previous studies of Filchnerella are more about the description of species morphology, and few about exploring the phylogenetic relationships with limited number of species and DNA fragments, which are insufficient to study the phylogeny of the entire genus, especially in order to understand the evolution of wing types in Filchnerella. To better understand the mitogenomic characteristics of Filchnerella and reveal its internal phylogenetic relationships, the complete mitochondrial genomes of Filchnerella sunanensis, Filchnerella amplivertica, Filchnerella dingxiensis, Filchnerella pamphagoides and Filchnerella nigritibia were sequenced and comparatively analyzed in this study. The mitogenomes of these five Filchnerella species were found to be highly conserved. Phylogenetic analyses, based on mitogenome data of 16 species of Pamphagidae, using both the maximum likelihood (ML) and Bayesian inference (BI) methods, supported the monophyly of Filchnerella and produced valuable data for the phylogenetic study of the genus. ABSTRACT: Mitogenomes have been widely used for exploring phylogenetic analysis and taxonomic diagnosis. In this study, the complete mitogenomes of five species of Filchnerella were sequenced, annotated and analyzed. Then, combined with other seven mitogenomes of Filchnerella and four of Pamphagidae, the phylogenetic relationships were reconstructed by maximum likelihood (ML) and Bayesian (BI) methods based on PCGs+rRNAs. The sizes of the five complete mitogenomes are Filchnerella sunanensis 15,656 bp, Filchnerella amplivertica 15,657 bp, Filchnerella nigritibia 15,661 bp, Filchnerella pamphagoides 15,661 bp and Filchnerella dingxiensis 15,666 bp. The nucleotide composition of mitogenomes is biased toward A+T. All tRNAs could be folded into the typical clover-leaf structure, except that tRNA Ser (AGN) lacked a dihydrouridine (DHU) arm. The phylogenetic relationships of Filchnerella species based on mitogenome data revealed a general pattern of wing evolution from long wing to increasingly shortened wing.
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spelling pubmed-83071042021-07-25 Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications Zheng, Fang-Yuan Shi, Qiu-Yue Ling, Yao Chen, Jian-Yu Zhang, Bo-Fan Li, Xin-Jiang Insects Article SIMPLE SUMMARY: Filchnerella belongs to Insecta, Orthoptera and Pamphagidae, of which there are 19 recorded species. The wings of Filchnerella are diverse, including three grasshopper wing types: longipennate, short wings and small wings. The previous studies of Filchnerella are more about the description of species morphology, and few about exploring the phylogenetic relationships with limited number of species and DNA fragments, which are insufficient to study the phylogeny of the entire genus, especially in order to understand the evolution of wing types in Filchnerella. To better understand the mitogenomic characteristics of Filchnerella and reveal its internal phylogenetic relationships, the complete mitochondrial genomes of Filchnerella sunanensis, Filchnerella amplivertica, Filchnerella dingxiensis, Filchnerella pamphagoides and Filchnerella nigritibia were sequenced and comparatively analyzed in this study. The mitogenomes of these five Filchnerella species were found to be highly conserved. Phylogenetic analyses, based on mitogenome data of 16 species of Pamphagidae, using both the maximum likelihood (ML) and Bayesian inference (BI) methods, supported the monophyly of Filchnerella and produced valuable data for the phylogenetic study of the genus. ABSTRACT: Mitogenomes have been widely used for exploring phylogenetic analysis and taxonomic diagnosis. In this study, the complete mitogenomes of five species of Filchnerella were sequenced, annotated and analyzed. Then, combined with other seven mitogenomes of Filchnerella and four of Pamphagidae, the phylogenetic relationships were reconstructed by maximum likelihood (ML) and Bayesian (BI) methods based on PCGs+rRNAs. The sizes of the five complete mitogenomes are Filchnerella sunanensis 15,656 bp, Filchnerella amplivertica 15,657 bp, Filchnerella nigritibia 15,661 bp, Filchnerella pamphagoides 15,661 bp and Filchnerella dingxiensis 15,666 bp. The nucleotide composition of mitogenomes is biased toward A+T. All tRNAs could be folded into the typical clover-leaf structure, except that tRNA Ser (AGN) lacked a dihydrouridine (DHU) arm. The phylogenetic relationships of Filchnerella species based on mitogenome data revealed a general pattern of wing evolution from long wing to increasingly shortened wing. MDPI 2021-07-02 /pmc/articles/PMC8307104/ /pubmed/34357265 http://dx.doi.org/10.3390/insects12070605 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zheng, Fang-Yuan
Shi, Qiu-Yue
Ling, Yao
Chen, Jian-Yu
Zhang, Bo-Fan
Li, Xin-Jiang
Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications
title Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications
title_full Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications
title_fullStr Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications
title_full_unstemmed Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications
title_short Comparative Analysis of Mitogenomes among Five Species of Filchnerella (Orthoptera: Acridoidea: Pamphagidae) and Their Phylogenetic and Taxonomic Implications
title_sort comparative analysis of mitogenomes among five species of filchnerella (orthoptera: acridoidea: pamphagidae) and their phylogenetic and taxonomic implications
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8307104/
https://www.ncbi.nlm.nih.gov/pubmed/34357265
http://dx.doi.org/10.3390/insects12070605
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