Cargando…

Co-expression network and comparative transcriptome analysis for fiber initiation and elongation reveal genetic differences in two lines from upland cotton CCRI70 RIL population

Upland cotton is the most widely planted for natural fiber around the world, and either lint percentage (LP) or fiber length (FL) is the crucial component tremendously affecting cotton yield and fiber quality, respectively. In this study, two lines MBZ70-053 and MBZ70-236 derived from G. hirsutum CC...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jiang, Xiao, Fan, Liqiang, Li, Pengtao, Zou, Xianyan, Zhang, Zhen, Fan, Senmiao, Gong, Juwu, Yuan, Youlu, Shang, Haihong
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2021
Materias:	Agricultural Science
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8308610/ https://www.ncbi.nlm.nih.gov/pubmed/34327061 http://dx.doi.org/10.7717/peerj.11812

Ejemplares similares

Quantitative Trait Loci and Transcriptome Analysis Reveal Genetic Basis of Fiber Quality Traits in CCRI70 RIL Population of Gossypium hirsutum
por: Jiang, Xiao, et al.
Publicado: (2021)

Identification of TPX2 Gene Family in Upland Cotton and its Functional Analysis in Cotton Fiber Development
por: Lei, Kang, et al.
Publicado: (2019)

Comparative transcriptional and co-expression network analysis of two upland cotton accessions with extreme phenotypic differences reveals molecular mechanisms of fiber development
por: He, Jiasen, et al.
Publicado: (2023)

Lint percentage and boll weight QTLs in three excellent upland cotton (Gossypium hirsutum): ZR014121, CCRI60, and EZ60
por: Niu, Hao, et al.
Publicado: (2023)

Co-Expression Network Analysis and Hub Gene Selection for High-Quality Fiber in Upland Cotton (Gossypium hirsutum) Using RNA Sequencing Analysis
por: Zou, Xianyan, et al.
Publicado: (2019)

Transcriptome Analysis Suggests That Chromosome Introgression Fragments from Sea Island Cotton (Gossypium barbadense) Increase Fiber Strength in Upland Cotton (Gossypium hirsutum)
por: Lu, Quanwei, et al.
Publicado: (2017)

Linkage and association analyses reveal that hub genes in energy-flow and lipid biosynthesis pathways form a cluster in upland cotton
por: Gong, Juwu, et al.
Publicado: (2022)

Inheritance, QTLs, and Candidate Genes of Lint Percentage in Upland Cotton
por: Niu, Hao, et al.
Publicado: (2022)

UDP-Glucose Dehydrogenases: Identification, Expression, and Function Analyses in Upland Cotton (Gossypium hirsutum)
por: Jia, Tingting, et al.
Publicado: (2021)

GWAS Analysis and QTL Identification of Fiber Quality Traits and Yield Components in Upland Cotton Using Enriched High-Density SNP Markers
por: Liu, Ruixian, et al.
Publicado: (2018)

UDP-glucose pyrophosphorylase: genome-wide identification, expression and functional analyses in Gossypium hirsutum
por: Xu, Zhongyang, et al.
Publicado: (2022)

Genome-wide identification, phylogeny, and expression analysis of pectin methylesterases reveal their major role in cotton fiber development
por: Li, Weijie, et al.
Publicado: (2016)

High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.)
por: Zhang, Zhen, et al.
Publicado: (2015)

Quantitative Trait Locus Mapping for Verticillium wilt Resistance in an Upland Cotton Recombinant Inbred Line Using SNP-Based High Density Genetic Map
por: Palanga, Koffi Kibalou, et al.
Publicado: (2017)

Comparative genomic analysis of the PKS genes in five species and expression analysis in upland cotton
por: Su, Xueqiang, et al.
Publicado: (2017)

Genome-wide identification and characterization of the CLASP_N gene family in upland cotton (Gossypium hirsutum L.)
por: Ji, Meijun, et al.
Publicado: (2022)

Data describing Upland cotton cultivars and advanced breeding lines used in Colombia
por: Burbano-Figueroa, Oscar, et al.
Publicado: (2019)

Genome-wide analysis of the CalS gene family in cotton reveals their potential roles in fiber development and responses to stress
por: Feng, Jiajia, et al.
Publicado: (2021)

Genome-Wide Identification and Expression Analysis of the Metacaspase Gene Family in Gossypium Species
por: Fan, Senmiao, et al.
Publicado: (2019)

Genome-wide identification, evolution, expression, and alternative splicing profiles of peroxiredoxin genes in cotton
por: Feng, Yulong, et al.
Publicado: (2021)

Identification of Candidate Cotton Genes Associated With Fiber Length Through Quantitative Trait Loci Mapping and RNA-Sequencing Using a Chromosome Segment Substitution Line
por: Lu, Quanwei, et al.
Publicado: (2021)

Genome-wide artificial introgressions of Gossypium barbadense into G. hirsutum reveal superior loci for simultaneous improvement of cotton fiber quality and yield traits
por: Li, Shaoqi, et al.
Publicado: (2022)

Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)
por: Ma, Jianjiang, et al.
Publicado: (2018)

Genome-Wide Analysis and Functional Characterization of LACS Gene Family Associated with Lipid Synthesis in Cotton (Gossypium spp.)
por: Zhong, Yike, et al.
Publicado: (2023)

GhPIPLC2D promotes cotton fiber elongation by enhancing ethylene biosynthesis
por: Zhu, Liping, et al.
Publicado: (2021)

GhPIPLC2D promotes cotton fiber elongation by enhancing ethylene biosynthesis
por: Zhu, Liping, et al.
Publicado: (2021)

Analysis of sea-island cotton and upland cotton in response to Verticillium dahliae infection by RNA sequencing
por: Sun, Quan, et al.
Publicado: (2013)

Construction of a high-density genetic map by specific locus amplified fragment sequencing (SLAF-seq) and its application to Quantitative Trait Loci (QTL) analysis for boll weight in upland cotton (Gossypium hirsutum.)
por: Zhang, Zhen, et al.
Publicado: (2016)

Transcriptome analysis and identification of genes associated with fruiting branch internode elongation in upland cotton
por: Ju, Feiyan, et al.
Publicado: (2019)

Identification of Associated SSR Markers for Yield Component and Fiber Quality Traits Based on Frame Map and Upland Cotton Collections
por: Qin, Hongde, et al.
Publicado: (2015)

Revealing Genetic Differences in Fiber Elongation between the Offspring of Sea Island Cotton and Upland Cotton Backcross Populations Based on Transcriptome and Weighted Gene Coexpression Networks
por: Li, Shengmei, et al.
Publicado: (2022)

Glycoproteome of Elongating Cotton Fiber Cells
por: Kumar, Saravanan, et al.
Publicado: (2013)

Functional analysis of the GbDWARF14 gene associated with branching development in cotton
por: Wang, Ping, et al.
Publicado: (2019)

Analysis of Flavonoids and the Flavonoid Structural Genes in Brown Fiber of Upland Cotton
por: Feng, Hongjie, et al.
Publicado: (2013)

Changes in DNA methylation assessed by genomic bisulfite sequencing suggest a role for DNA methylation in cotton fruiting branch development
por: Sun, Quan, et al.
Publicado: (2018)

QTLs Analysis and Validation for Fiber Quality Traits Using Maternal Backcross Population in Upland Cotton
por: Ma, Lingling, et al.
Publicado: (2017)

Functional Characterization of a Dihydroflavanol 4-Reductase from the Fiber of Upland Cotton (Gossypium hirsutum)
por: Wang, Le, et al.
Publicado: (2016)

Detection of epistasis interaction loci for fiber quality-related trait via 3VmrMLM in upland cotton
por: Han, Zhimin, et al.
Publicado: (2023)

Quantitative trait loci associated with straighthead-resistance used for marker assisted selection in rice (Oryza sativa L.) RIL populations
por: Pan, Xuhao, et al.
Publicado: (2023)

Delineating the glycoproteome of elongating cotton fiber cells
por: Kumar, Saravanan, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_refjm8dp101dm935pe1p8sstli