Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation

T. hemsleyanum plants with different geographical origins contain enormous genetic variability, which causes different composition and content of flavonoids. In this research, integrated analysis of transcriptome and metabolome were performed in two ecotypes of T. hemsleyanum. There were 5428 differ...

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Detalles Bibliográficos
Autores principales: Yin, Shuya, Cui, Hairui, Zhang, Le, Yan, Jianli, Qian, Lihua, Ruan, Songlin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8309080/
https://www.ncbi.nlm.nih.gov/pubmed/34202839
http://dx.doi.org/10.3390/plants10071288
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author Yin, Shuya
Cui, Hairui
Zhang, Le
Yan, Jianli
Qian, Lihua
Ruan, Songlin
author_facet Yin, Shuya
Cui, Hairui
Zhang, Le
Yan, Jianli
Qian, Lihua
Ruan, Songlin
author_sort Yin, Shuya
collection PubMed
description T. hemsleyanum plants with different geographical origins contain enormous genetic variability, which causes different composition and content of flavonoids. In this research, integrated analysis of transcriptome and metabolome were performed in two ecotypes of T. hemsleyanum. There were 5428 different expressed transcripts and 236 differentially accumulated metabolites, phenylpropane and flavonoid biosynthesis were most predominantly enriched. A regulatory network of 9 transcripts and 11 compounds up-regulated in RG was formed, and chlorogenic acid was a core component.
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spelling pubmed-83090802021-07-25 Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation Yin, Shuya Cui, Hairui Zhang, Le Yan, Jianli Qian, Lihua Ruan, Songlin Plants (Basel) Article T. hemsleyanum plants with different geographical origins contain enormous genetic variability, which causes different composition and content of flavonoids. In this research, integrated analysis of transcriptome and metabolome were performed in two ecotypes of T. hemsleyanum. There were 5428 different expressed transcripts and 236 differentially accumulated metabolites, phenylpropane and flavonoid biosynthesis were most predominantly enriched. A regulatory network of 9 transcripts and 11 compounds up-regulated in RG was formed, and chlorogenic acid was a core component. MDPI 2021-06-24 /pmc/articles/PMC8309080/ /pubmed/34202839 http://dx.doi.org/10.3390/plants10071288 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yin, Shuya
Cui, Hairui
Zhang, Le
Yan, Jianli
Qian, Lihua
Ruan, Songlin
Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation
title Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation
title_full Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation
title_fullStr Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation
title_full_unstemmed Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation
title_short Transcriptome and Metabolome Integrated Analysis of Two Ecotypes of Tetrastigma hemsleyanum Reveals Candidate Genes Involved in Chlorogenic Acid Accumulation
title_sort transcriptome and metabolome integrated analysis of two ecotypes of tetrastigma hemsleyanum reveals candidate genes involved in chlorogenic acid accumulation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8309080/
https://www.ncbi.nlm.nih.gov/pubmed/34202839
http://dx.doi.org/10.3390/plants10071288
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