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Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea

On-time seed variety recognition is critical to limit qualitative and quantitative yield loss and asynchronous crop production. The conventional method is a subjective and error-prone process, since it relies on human experts and usually requires accredited seed material. This paper presents a convo...

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Autores principales: Taheri-Garavand, Amin, Nasiri, Amin, Fanourakis, Dimitrios, Fatahi, Soodabeh, Omid, Mahmoud, Nikoloudakis, Nikolaos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8309301/
https://www.ncbi.nlm.nih.gov/pubmed/34371609
http://dx.doi.org/10.3390/plants10071406
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author Taheri-Garavand, Amin
Nasiri, Amin
Fanourakis, Dimitrios
Fatahi, Soodabeh
Omid, Mahmoud
Nikoloudakis, Nikolaos
author_facet Taheri-Garavand, Amin
Nasiri, Amin
Fanourakis, Dimitrios
Fatahi, Soodabeh
Omid, Mahmoud
Nikoloudakis, Nikolaos
author_sort Taheri-Garavand, Amin
collection PubMed
description On-time seed variety recognition is critical to limit qualitative and quantitative yield loss and asynchronous crop production. The conventional method is a subjective and error-prone process, since it relies on human experts and usually requires accredited seed material. This paper presents a convolutional neural network (CNN) framework for automatic identification of chickpea varieties by using seed images in the visible spectrum (400–700 nm). Two low-cost devices were employed for image acquisition. Lighting and imaging (background, focus, angle, and camera-to-sample distance) conditions were variable. The VGG16 architecture was modified by a global average pooling layer, dense layers, a batch normalization layer, and a dropout layer. Distinguishing the intricate visual features of the diverse chickpea varieties and recognizing them according to these features was conceivable by the obtained model. A five-fold cross-validation was performed to evaluate the uncertainty and predictive efficiency of the CNN model. The modified deep learning model was able to recognize different chickpea seed varieties with an average classification accuracy of over 94%. In addition, the proposed vision-based model was very robust in seed variety identification, and independent of image acquisition device, light environment, and imaging settings. This opens the avenue for the extension into novel applications using mobile phones to acquire and process information in situ. The proposed procedure derives possibilities for deployment in the seed industry and mobile applications for fast and robust automated seed identification practices.
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spelling pubmed-83093012021-07-25 Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea Taheri-Garavand, Amin Nasiri, Amin Fanourakis, Dimitrios Fatahi, Soodabeh Omid, Mahmoud Nikoloudakis, Nikolaos Plants (Basel) Article On-time seed variety recognition is critical to limit qualitative and quantitative yield loss and asynchronous crop production. The conventional method is a subjective and error-prone process, since it relies on human experts and usually requires accredited seed material. This paper presents a convolutional neural network (CNN) framework for automatic identification of chickpea varieties by using seed images in the visible spectrum (400–700 nm). Two low-cost devices were employed for image acquisition. Lighting and imaging (background, focus, angle, and camera-to-sample distance) conditions were variable. The VGG16 architecture was modified by a global average pooling layer, dense layers, a batch normalization layer, and a dropout layer. Distinguishing the intricate visual features of the diverse chickpea varieties and recognizing them according to these features was conceivable by the obtained model. A five-fold cross-validation was performed to evaluate the uncertainty and predictive efficiency of the CNN model. The modified deep learning model was able to recognize different chickpea seed varieties with an average classification accuracy of over 94%. In addition, the proposed vision-based model was very robust in seed variety identification, and independent of image acquisition device, light environment, and imaging settings. This opens the avenue for the extension into novel applications using mobile phones to acquire and process information in situ. The proposed procedure derives possibilities for deployment in the seed industry and mobile applications for fast and robust automated seed identification practices. MDPI 2021-07-09 /pmc/articles/PMC8309301/ /pubmed/34371609 http://dx.doi.org/10.3390/plants10071406 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Taheri-Garavand, Amin
Nasiri, Amin
Fanourakis, Dimitrios
Fatahi, Soodabeh
Omid, Mahmoud
Nikoloudakis, Nikolaos
Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea
title Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea
title_full Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea
title_fullStr Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea
title_full_unstemmed Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea
title_short Automated In Situ Seed Variety Identification via Deep Learning: A Case Study in Chickpea
title_sort automated in situ seed variety identification via deep learning: a case study in chickpea
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8309301/
https://www.ncbi.nlm.nih.gov/pubmed/34371609
http://dx.doi.org/10.3390/plants10071406
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