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A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors

Renal cell carcinoma (RCC) is the most common and a highly aggressive type of malignant renal tumor. In this manuscript, we aim to identify and integrate the optimal discriminating morphological, textural, and functional features that best describe the malignancy status of a given renal tumor. The i...

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Autores principales: Shehata, Mohamed, Alksas, Ahmed, Abouelkheir, Rasha T., Elmahdy, Ahmed, Shaffie, Ahmed, Soliman, Ahmed, Ghazal, Mohammed, Abu Khalifeh, Hadil, Salim, Reem, Abdel Razek, Ahmed Abdel Khalek, Alghamdi, Norah Saleh, El-Baz, Ayman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8309718/
https://www.ncbi.nlm.nih.gov/pubmed/34300667
http://dx.doi.org/10.3390/s21144928
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author Shehata, Mohamed
Alksas, Ahmed
Abouelkheir, Rasha T.
Elmahdy, Ahmed
Shaffie, Ahmed
Soliman, Ahmed
Ghazal, Mohammed
Abu Khalifeh, Hadil
Salim, Reem
Abdel Razek, Ahmed Abdel Khalek
Alghamdi, Norah Saleh
El-Baz, Ayman
author_facet Shehata, Mohamed
Alksas, Ahmed
Abouelkheir, Rasha T.
Elmahdy, Ahmed
Shaffie, Ahmed
Soliman, Ahmed
Ghazal, Mohammed
Abu Khalifeh, Hadil
Salim, Reem
Abdel Razek, Ahmed Abdel Khalek
Alghamdi, Norah Saleh
El-Baz, Ayman
author_sort Shehata, Mohamed
collection PubMed
description Renal cell carcinoma (RCC) is the most common and a highly aggressive type of malignant renal tumor. In this manuscript, we aim to identify and integrate the optimal discriminating morphological, textural, and functional features that best describe the malignancy status of a given renal tumor. The integrated discriminating features may lead to the development of a novel comprehensive renal cancer computer-assisted diagnosis (RC-CAD) system with the ability to discriminate between benign and malignant renal tumors and specify the malignancy subtypes for optimal medical management. Informed consent was obtained from a total of 140 biopsy-proven patients to participate in the study (male = 72 and female = 68, age range = 15 to 87 years). There were 70 patients who had RCC (40 clear cell RCC (ccRCC), 30 nonclear cell RCC (nccRCC)), while the other 70 had benign angiomyolipoma tumors. Contrast-enhanced computed tomography (CE-CT) images were acquired, and renal tumors were segmented for all patients to allow the extraction of discriminating imaging features. The RC-CAD system incorporates the following major steps: (i) applying a new parametric spherical harmonic technique to estimate the morphological features, (ii) modeling a novel angular invariant gray-level co-occurrence matrix to estimate the textural features, and (iii) constructing wash-in/wash-out slopes to estimate the functional features by quantifying enhancement variations across different CE-CT phases. These features were subsequently combined and processed using a two-stage multilayer perceptron artificial neural network (MLP-ANN) classifier to classify the renal tumor as benign or malignant and identify the malignancy subtype as well. Using the combined features and a leave-one-subject-out cross-validation approach, the developed RC-CAD system achieved a sensitivity of [Formula: see text] , a specificity of [Formula: see text] , and Dice similarity coefficient of [Formula: see text] in differentiating malignant from benign tumors, as well as an overall accuracy of [Formula: see text] in discriminating ccRCC from nccRCC. The diagnostic abilities of the developed RC-CAD system were further validated using a randomly stratified 10-fold cross-validation approach. The obtained results using the proposed MLP-ANN classification model outperformed other machine learning classifiers (e.g., support vector machine, random forests, relational functional gradient boosting, etc.). Hence, integrating morphological, textural, and functional features enhances the diagnostic performance, making the proposal a reliable noninvasive diagnostic tool for renal tumors.
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spelling pubmed-83097182021-07-25 A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors Shehata, Mohamed Alksas, Ahmed Abouelkheir, Rasha T. Elmahdy, Ahmed Shaffie, Ahmed Soliman, Ahmed Ghazal, Mohammed Abu Khalifeh, Hadil Salim, Reem Abdel Razek, Ahmed Abdel Khalek Alghamdi, Norah Saleh El-Baz, Ayman Sensors (Basel) Article Renal cell carcinoma (RCC) is the most common and a highly aggressive type of malignant renal tumor. In this manuscript, we aim to identify and integrate the optimal discriminating morphological, textural, and functional features that best describe the malignancy status of a given renal tumor. The integrated discriminating features may lead to the development of a novel comprehensive renal cancer computer-assisted diagnosis (RC-CAD) system with the ability to discriminate between benign and malignant renal tumors and specify the malignancy subtypes for optimal medical management. Informed consent was obtained from a total of 140 biopsy-proven patients to participate in the study (male = 72 and female = 68, age range = 15 to 87 years). There were 70 patients who had RCC (40 clear cell RCC (ccRCC), 30 nonclear cell RCC (nccRCC)), while the other 70 had benign angiomyolipoma tumors. Contrast-enhanced computed tomography (CE-CT) images were acquired, and renal tumors were segmented for all patients to allow the extraction of discriminating imaging features. The RC-CAD system incorporates the following major steps: (i) applying a new parametric spherical harmonic technique to estimate the morphological features, (ii) modeling a novel angular invariant gray-level co-occurrence matrix to estimate the textural features, and (iii) constructing wash-in/wash-out slopes to estimate the functional features by quantifying enhancement variations across different CE-CT phases. These features were subsequently combined and processed using a two-stage multilayer perceptron artificial neural network (MLP-ANN) classifier to classify the renal tumor as benign or malignant and identify the malignancy subtype as well. Using the combined features and a leave-one-subject-out cross-validation approach, the developed RC-CAD system achieved a sensitivity of [Formula: see text] , a specificity of [Formula: see text] , and Dice similarity coefficient of [Formula: see text] in differentiating malignant from benign tumors, as well as an overall accuracy of [Formula: see text] in discriminating ccRCC from nccRCC. The diagnostic abilities of the developed RC-CAD system were further validated using a randomly stratified 10-fold cross-validation approach. The obtained results using the proposed MLP-ANN classification model outperformed other machine learning classifiers (e.g., support vector machine, random forests, relational functional gradient boosting, etc.). Hence, integrating morphological, textural, and functional features enhances the diagnostic performance, making the proposal a reliable noninvasive diagnostic tool for renal tumors. MDPI 2021-07-20 /pmc/articles/PMC8309718/ /pubmed/34300667 http://dx.doi.org/10.3390/s21144928 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shehata, Mohamed
Alksas, Ahmed
Abouelkheir, Rasha T.
Elmahdy, Ahmed
Shaffie, Ahmed
Soliman, Ahmed
Ghazal, Mohammed
Abu Khalifeh, Hadil
Salim, Reem
Abdel Razek, Ahmed Abdel Khalek
Alghamdi, Norah Saleh
El-Baz, Ayman
A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors
title A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors
title_full A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors
title_fullStr A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors
title_full_unstemmed A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors
title_short A Comprehensive Computer-Assisted Diagnosis System for Early Assessment of Renal Cancer Tumors
title_sort comprehensive computer-assisted diagnosis system for early assessment of renal cancer tumors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8309718/
https://www.ncbi.nlm.nih.gov/pubmed/34300667
http://dx.doi.org/10.3390/s21144928
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