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The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae

Species belonging to the genus Erwinia are predominantly plant pathogens. A number of bacteriophages capable of infecting Erwinia have been used for the control of plant diseases such as fire blight. Public repositories provide the complete genome information for such phages, which includes genomes...

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Autores principales: Kim, Sang Guen, Roh, Eunjung, Park, Jungkum, Giri, Sib Sankar, Kwon, Jun, Kim, Sang Wha, Kang, Jeong Woo, Lee, Sung Bin, Jung, Won Joon, Lee, Young Min, Cho, Kevin, Park, Se Chang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8310351/
https://www.ncbi.nlm.nih.gov/pubmed/34202208
http://dx.doi.org/10.3390/v13071231
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author Kim, Sang Guen
Roh, Eunjung
Park, Jungkum
Giri, Sib Sankar
Kwon, Jun
Kim, Sang Wha
Kang, Jeong Woo
Lee, Sung Bin
Jung, Won Joon
Lee, Young Min
Cho, Kevin
Park, Se Chang
author_facet Kim, Sang Guen
Roh, Eunjung
Park, Jungkum
Giri, Sib Sankar
Kwon, Jun
Kim, Sang Wha
Kang, Jeong Woo
Lee, Sung Bin
Jung, Won Joon
Lee, Young Min
Cho, Kevin
Park, Se Chang
author_sort Kim, Sang Guen
collection PubMed
description Species belonging to the genus Erwinia are predominantly plant pathogens. A number of bacteriophages capable of infecting Erwinia have been used for the control of plant diseases such as fire blight. Public repositories provide the complete genome information for such phages, which includes genomes ranging from 30 kb to 350 kb in size. However, limited information is available regarding bacteriophages belonging to the family Siphoviridae. A novel lytic siphophage, pEp_SNUABM_08, which specifically infects Erwinia pyrifoliae, was isolated from the soil of an affected apple orchard in South Korea. A comprehensive genome analysis was performed using the Erwinia-infecting siphophage. The whole genome of pEp_SNUABM_08 comprised 62,784 bp (GC content, 57.24%) with 79 open reading frames. The genomic characteristics confirmed that pEp_SNUABM_08 is a singleton lytic bacteriophage belonging to the family Siphoviridae, and no closely related phages have been reported thus far. Our study not only characterized a unique phage, but also provides insight into the genetic diversity of Erwinia bacteriophages.
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spelling pubmed-83103512021-07-25 The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae Kim, Sang Guen Roh, Eunjung Park, Jungkum Giri, Sib Sankar Kwon, Jun Kim, Sang Wha Kang, Jeong Woo Lee, Sung Bin Jung, Won Joon Lee, Young Min Cho, Kevin Park, Se Chang Viruses Article Species belonging to the genus Erwinia are predominantly plant pathogens. A number of bacteriophages capable of infecting Erwinia have been used for the control of plant diseases such as fire blight. Public repositories provide the complete genome information for such phages, which includes genomes ranging from 30 kb to 350 kb in size. However, limited information is available regarding bacteriophages belonging to the family Siphoviridae. A novel lytic siphophage, pEp_SNUABM_08, which specifically infects Erwinia pyrifoliae, was isolated from the soil of an affected apple orchard in South Korea. A comprehensive genome analysis was performed using the Erwinia-infecting siphophage. The whole genome of pEp_SNUABM_08 comprised 62,784 bp (GC content, 57.24%) with 79 open reading frames. The genomic characteristics confirmed that pEp_SNUABM_08 is a singleton lytic bacteriophage belonging to the family Siphoviridae, and no closely related phages have been reported thus far. Our study not only characterized a unique phage, but also provides insight into the genetic diversity of Erwinia bacteriophages. MDPI 2021-06-25 /pmc/articles/PMC8310351/ /pubmed/34202208 http://dx.doi.org/10.3390/v13071231 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kim, Sang Guen
Roh, Eunjung
Park, Jungkum
Giri, Sib Sankar
Kwon, Jun
Kim, Sang Wha
Kang, Jeong Woo
Lee, Sung Bin
Jung, Won Joon
Lee, Young Min
Cho, Kevin
Park, Se Chang
The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae
title The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae
title_full The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae
title_fullStr The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae
title_full_unstemmed The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae
title_short The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae
title_sort bacteriophage pep_snuabm_08 is a novel singleton siphovirus with high host specificity for erwinia pyrifoliae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8310351/
https://www.ncbi.nlm.nih.gov/pubmed/34202208
http://dx.doi.org/10.3390/v13071231
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