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Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes
In humans, taste genes are responsible for perceiving at least 5 different taste qualities. Human taste genes’ evolutionary mechanisms need to be explored. We compiled a list of 69 human taste-related genes and divided them into 7 functional groups. We carried out comparative genomic and evolutionar...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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SAGE Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8312168/ https://www.ncbi.nlm.nih.gov/pubmed/34366662 http://dx.doi.org/10.1177/11769343211035141 |
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author | Wang, Yupeng Sun, Ying Joseph, Paule Valery |
author_facet | Wang, Yupeng Sun, Ying Joseph, Paule Valery |
author_sort | Wang, Yupeng |
collection | PubMed |
description | In humans, taste genes are responsible for perceiving at least 5 different taste qualities. Human taste genes’ evolutionary mechanisms need to be explored. We compiled a list of 69 human taste-related genes and divided them into 7 functional groups. We carried out comparative genomic and evolutionary analyses for these taste genes based on 8 vertebrate species. We found that relative to other groups of human taste genes, human TAS2R genes have a higher proportion of tandem duplicates, suggesting that tandem duplications have contributed significantly to the expansion of the human TAS2R gene family. Human TAS2R genes tend to have fewer collinear genes in outgroup species and evolve faster, suggesting that human TAS2R genes have experienced more gene relocations. Moreover, human TAS2R genes tend to be under more relaxed purifying selection than other genes. Our study sheds new insights into diverse and contrasting evolutionary patterns among human taste genes. |
format | Online Article Text |
id | pubmed-8312168 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-83121682021-08-06 Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes Wang, Yupeng Sun, Ying Joseph, Paule Valery Evol Bioinform Online Original Research In humans, taste genes are responsible for perceiving at least 5 different taste qualities. Human taste genes’ evolutionary mechanisms need to be explored. We compiled a list of 69 human taste-related genes and divided them into 7 functional groups. We carried out comparative genomic and evolutionary analyses for these taste genes based on 8 vertebrate species. We found that relative to other groups of human taste genes, human TAS2R genes have a higher proportion of tandem duplicates, suggesting that tandem duplications have contributed significantly to the expansion of the human TAS2R gene family. Human TAS2R genes tend to have fewer collinear genes in outgroup species and evolve faster, suggesting that human TAS2R genes have experienced more gene relocations. Moreover, human TAS2R genes tend to be under more relaxed purifying selection than other genes. Our study sheds new insights into diverse and contrasting evolutionary patterns among human taste genes. SAGE Publications 2021-07-24 /pmc/articles/PMC8312168/ /pubmed/34366662 http://dx.doi.org/10.1177/11769343211035141 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Wang, Yupeng Sun, Ying Joseph, Paule Valery Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes |
title | Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes |
title_full | Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes |
title_fullStr | Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes |
title_full_unstemmed | Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes |
title_short | Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes |
title_sort | contrasting patterns of gene duplication, relocation, and selection among human taste genes |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8312168/ https://www.ncbi.nlm.nih.gov/pubmed/34366662 http://dx.doi.org/10.1177/11769343211035141 |
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