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Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1
Introduction: Owing to the poor prognosis of Ewing's sarcoma, reliable prognostic biomarkers are highly warranted for clinical diagnosis of the disease. Materials and Methods: A combination of the weighted correlation network analysis and differentially expression analysis was used for initial...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8312448/ https://www.ncbi.nlm.nih.gov/pubmed/34233293 http://dx.doi.org/10.18632/aging.203242 |
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author | Jiang, Jie Zhan, Xinli Xu, Guoyong Liang, Tuo Yu, Chaojie Liao, Shian Chen, Liyi Huang, Shengsheng Sun, Xuhua Yi, Ming Zhang, Zide Yao, Yuanlin Liu, Chong |
author_facet | Jiang, Jie Zhan, Xinli Xu, Guoyong Liang, Tuo Yu, Chaojie Liao, Shian Chen, Liyi Huang, Shengsheng Sun, Xuhua Yi, Ming Zhang, Zide Yao, Yuanlin Liu, Chong |
author_sort | Jiang, Jie |
collection | PubMed |
description | Introduction: Owing to the poor prognosis of Ewing's sarcoma, reliable prognostic biomarkers are highly warranted for clinical diagnosis of the disease. Materials and Methods: A combination of the weighted correlation network analysis and differentially expression analysis was used for initial screening; glycolysis-related genes were extracted and subjected to univariate Cox, LASSO regression, and multivariate Cox analyses to construct prognostic models. The immune cell composition of each sample was analysed using CIBERSORT software. Immunohistochemical analysis was performed for assessing the differential expression of modelled genes in Ewing's sarcoma and paraneoplastic tissues. Results: A logistic regression model constructed for the prognosis of Ewing's sarcoma exhibited that the patient survival rate in the high-risk group is much lower than in the low-risk group. CIBERSORT analysis exhibited a strong correlation of Ewing's sarcoma with naïve B cells, CD8(+) T cells, activated NK cells, and M0 macrophages (P < 0.05). Immunohistochemical analysis confirmed the study findings. Conclusions: GLCE and TPI1 can be used as prognostic biomarkers to predict the prognosis of Ewing's sarcoma, and a close association of Ewing's sarcoma with naïve B cells, CD8(+) T cells, activated NK cells, and M0 macrophages provides a novel approach to the disease immunotherapy. |
format | Online Article Text |
id | pubmed-8312448 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-83124482021-07-27 Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 Jiang, Jie Zhan, Xinli Xu, Guoyong Liang, Tuo Yu, Chaojie Liao, Shian Chen, Liyi Huang, Shengsheng Sun, Xuhua Yi, Ming Zhang, Zide Yao, Yuanlin Liu, Chong Aging (Albany NY) Research Paper Introduction: Owing to the poor prognosis of Ewing's sarcoma, reliable prognostic biomarkers are highly warranted for clinical diagnosis of the disease. Materials and Methods: A combination of the weighted correlation network analysis and differentially expression analysis was used for initial screening; glycolysis-related genes were extracted and subjected to univariate Cox, LASSO regression, and multivariate Cox analyses to construct prognostic models. The immune cell composition of each sample was analysed using CIBERSORT software. Immunohistochemical analysis was performed for assessing the differential expression of modelled genes in Ewing's sarcoma and paraneoplastic tissues. Results: A logistic regression model constructed for the prognosis of Ewing's sarcoma exhibited that the patient survival rate in the high-risk group is much lower than in the low-risk group. CIBERSORT analysis exhibited a strong correlation of Ewing's sarcoma with naïve B cells, CD8(+) T cells, activated NK cells, and M0 macrophages (P < 0.05). Immunohistochemical analysis confirmed the study findings. Conclusions: GLCE and TPI1 can be used as prognostic biomarkers to predict the prognosis of Ewing's sarcoma, and a close association of Ewing's sarcoma with naïve B cells, CD8(+) T cells, activated NK cells, and M0 macrophages provides a novel approach to the disease immunotherapy. Impact Journals 2021-07-07 /pmc/articles/PMC8312448/ /pubmed/34233293 http://dx.doi.org/10.18632/aging.203242 Text en Copyright: © 2021 Jiang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Jiang, Jie Zhan, Xinli Xu, Guoyong Liang, Tuo Yu, Chaojie Liao, Shian Chen, Liyi Huang, Shengsheng Sun, Xuhua Yi, Ming Zhang, Zide Yao, Yuanlin Liu, Chong Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 |
title | Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 |
title_full | Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 |
title_fullStr | Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 |
title_full_unstemmed | Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 |
title_short | Glycolysis- and immune-related novel prognostic biomarkers of Ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 |
title_sort | glycolysis- and immune-related novel prognostic biomarkers of ewing's sarcoma: glucuronic acid epimerase and triosephosphate isomerase 1 |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8312448/ https://www.ncbi.nlm.nih.gov/pubmed/34233293 http://dx.doi.org/10.18632/aging.203242 |
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