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Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region
Polyhydroxyalkanoate (PHA) is stored as an important carbon and energy source in bacterial cells. For biomedical applications, gram-positive bacteria can be better sources of PHAs, since they lack outer membrane lipopolysaccharide. Although gram-positive Streptomyces coelicolor A3(2) has been indica...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Scientific and Technological Research Council of Turkey
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8313934/ https://www.ncbi.nlm.nih.gov/pubmed/34377052 http://dx.doi.org/10.3906/biy-2011-16 |
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author | DEMİR ÖKSÜZ, Zeynep DORUK, Tuğrul YAĞCI, Nevin TUNCA GEDİK, Sedef |
author_facet | DEMİR ÖKSÜZ, Zeynep DORUK, Tuğrul YAĞCI, Nevin TUNCA GEDİK, Sedef |
author_sort | DEMİR ÖKSÜZ, Zeynep |
collection | PubMed |
description | Polyhydroxyalkanoate (PHA) is stored as an important carbon and energy source in bacterial cells. For biomedical applications, gram-positive bacteria can be better sources of PHAs, since they lack outer membrane lipopolysaccharide. Although gram-positive Streptomyces coelicolor A3(2) has been indicated as a high potential PHA producer, pha C gene that encodes the key enzyme PHA synthase in the metabolic pathway is not determined in its genome. BLAST search results of the GenBank database argued that SCO7613 could specify a putative polyhydroxyalkanoate synthase (PhaC) responsible for PHA biosynthesis. Deduced amino acid sequence of SCO7613 showed the presence of conserved lipase box like sequence, (555)GASAG(559), in which serine residue was present as the active nucleophile. Present study describes deletion of putative S. coelicolor pha C gene via PCR dependent method. We showed that SCO7613 is not an essential gene in S. coelicolor and its deletion affected PHA accumulation negatively although it is not ceased. Transcomplementation abolished the mutant phenotype, demonstrating that the decrease in PHA resulted from the deletion of SCO7613. |
format | Online Article Text |
id | pubmed-8313934 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Scientific and Technological Research Council of Turkey |
record_format | MEDLINE/PubMed |
spelling | pubmed-83139342021-08-09 Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region DEMİR ÖKSÜZ, Zeynep DORUK, Tuğrul YAĞCI, Nevin TUNCA GEDİK, Sedef Turk J Biol Article Polyhydroxyalkanoate (PHA) is stored as an important carbon and energy source in bacterial cells. For biomedical applications, gram-positive bacteria can be better sources of PHAs, since they lack outer membrane lipopolysaccharide. Although gram-positive Streptomyces coelicolor A3(2) has been indicated as a high potential PHA producer, pha C gene that encodes the key enzyme PHA synthase in the metabolic pathway is not determined in its genome. BLAST search results of the GenBank database argued that SCO7613 could specify a putative polyhydroxyalkanoate synthase (PhaC) responsible for PHA biosynthesis. Deduced amino acid sequence of SCO7613 showed the presence of conserved lipase box like sequence, (555)GASAG(559), in which serine residue was present as the active nucleophile. Present study describes deletion of putative S. coelicolor pha C gene via PCR dependent method. We showed that SCO7613 is not an essential gene in S. coelicolor and its deletion affected PHA accumulation negatively although it is not ceased. Transcomplementation abolished the mutant phenotype, demonstrating that the decrease in PHA resulted from the deletion of SCO7613. The Scientific and Technological Research Council of Turkey 2021-06-23 /pmc/articles/PMC8313934/ /pubmed/34377052 http://dx.doi.org/10.3906/biy-2011-16 Text en Copyright © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Article DEMİR ÖKSÜZ, Zeynep DORUK, Tuğrul YAĞCI, Nevin TUNCA GEDİK, Sedef Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region |
title | Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region |
title_full | Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region |
title_fullStr | Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region |
title_full_unstemmed | Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region |
title_short | Polyhydroxyalkanoate accumulation in Streptomyces coelicolor affected by SCO7613 gene region |
title_sort | polyhydroxyalkanoate accumulation in streptomyces coelicolor affected by sco7613 gene region |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8313934/ https://www.ncbi.nlm.nih.gov/pubmed/34377052 http://dx.doi.org/10.3906/biy-2011-16 |
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