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Country transition index based on hierarchical clustering to predict next COVID-19 waves

COVID-19 has widely spread around the world, impacting the health systems of several countries in addition to the collateral damage that societies will face in the next years. Although the comparison between countries is essential for controlling this disease, the main challenge is the fact of count...

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Autores principales: Rios, Ricardo A., Nogueira, Tatiane, Coimbra, Danilo B., Lopes, Tiago J. S., Abraham, Ajith, Mello, Rodrigo F. de
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8316493/
https://www.ncbi.nlm.nih.gov/pubmed/34315932
http://dx.doi.org/10.1038/s41598-021-94661-z
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author Rios, Ricardo A.
Nogueira, Tatiane
Coimbra, Danilo B.
Lopes, Tiago J. S.
Abraham, Ajith
Mello, Rodrigo F. de
author_facet Rios, Ricardo A.
Nogueira, Tatiane
Coimbra, Danilo B.
Lopes, Tiago J. S.
Abraham, Ajith
Mello, Rodrigo F. de
author_sort Rios, Ricardo A.
collection PubMed
description COVID-19 has widely spread around the world, impacting the health systems of several countries in addition to the collateral damage that societies will face in the next years. Although the comparison between countries is essential for controlling this disease, the main challenge is the fact of countries are not simultaneously affected by the virus. Therefore, from the COVID-19 dataset by the Johns Hopkins University Center for Systems Science and Engineering, we present a temporal analysis on the number of new cases and deaths among countries using artificial intelligence. Our approach incrementally models the cases using a hierarchical clustering that emphasizes country transitions between infection groups over time. Then, one can compare the current situation of a country against others that have already faced previous waves. By using our approach, we designed a transition index to estimate the most probable countries’ movements between infectious groups to predict next wave trends. We draw two important conclusions: (1) we show the historical infection path taken by specific countries and emphasize changing points that occur when countries move between clusters with small, medium, or large number of cases; (2) we estimate new waves for specific countries using the transition index.
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spelling pubmed-83164932021-07-28 Country transition index based on hierarchical clustering to predict next COVID-19 waves Rios, Ricardo A. Nogueira, Tatiane Coimbra, Danilo B. Lopes, Tiago J. S. Abraham, Ajith Mello, Rodrigo F. de Sci Rep Article COVID-19 has widely spread around the world, impacting the health systems of several countries in addition to the collateral damage that societies will face in the next years. Although the comparison between countries is essential for controlling this disease, the main challenge is the fact of countries are not simultaneously affected by the virus. Therefore, from the COVID-19 dataset by the Johns Hopkins University Center for Systems Science and Engineering, we present a temporal analysis on the number of new cases and deaths among countries using artificial intelligence. Our approach incrementally models the cases using a hierarchical clustering that emphasizes country transitions between infection groups over time. Then, one can compare the current situation of a country against others that have already faced previous waves. By using our approach, we designed a transition index to estimate the most probable countries’ movements between infectious groups to predict next wave trends. We draw two important conclusions: (1) we show the historical infection path taken by specific countries and emphasize changing points that occur when countries move between clusters with small, medium, or large number of cases; (2) we estimate new waves for specific countries using the transition index. Nature Publishing Group UK 2021-07-27 /pmc/articles/PMC8316493/ /pubmed/34315932 http://dx.doi.org/10.1038/s41598-021-94661-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Rios, Ricardo A.
Nogueira, Tatiane
Coimbra, Danilo B.
Lopes, Tiago J. S.
Abraham, Ajith
Mello, Rodrigo F. de
Country transition index based on hierarchical clustering to predict next COVID-19 waves
title Country transition index based on hierarchical clustering to predict next COVID-19 waves
title_full Country transition index based on hierarchical clustering to predict next COVID-19 waves
title_fullStr Country transition index based on hierarchical clustering to predict next COVID-19 waves
title_full_unstemmed Country transition index based on hierarchical clustering to predict next COVID-19 waves
title_short Country transition index based on hierarchical clustering to predict next COVID-19 waves
title_sort country transition index based on hierarchical clustering to predict next covid-19 waves
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8316493/
https://www.ncbi.nlm.nih.gov/pubmed/34315932
http://dx.doi.org/10.1038/s41598-021-94661-z
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