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Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings

Starting with a handful of SARS-CoV-2 infections in dormitory residents in late March 2020, rapid transmission in their dense living environments ensued and by October 2020, more than 50,000 acute infections were identified across various dormitories in Singapore. The aim of the study is to identify...

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Autores principales: Pung, Rachael, Lin, Bernard, Maurer-Stroh, Sebastian, Sirota, Fernanda L., Mak, Tze Minn, Octavia, Sophie, Pang, Junxiong, Tan, Iain Beehuat, Tan, Clive, Ong, Biauw Chi, Cook, Alex R., Lee, Vernon J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8316572/
https://www.ncbi.nlm.nih.gov/pubmed/34315928
http://dx.doi.org/10.1038/s41598-021-94463-3
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author Pung, Rachael
Lin, Bernard
Maurer-Stroh, Sebastian
Sirota, Fernanda L.
Mak, Tze Minn
Octavia, Sophie
Pang, Junxiong
Tan, Iain Beehuat
Tan, Clive
Ong, Biauw Chi
Cook, Alex R.
Lee, Vernon J.
author_facet Pung, Rachael
Lin, Bernard
Maurer-Stroh, Sebastian
Sirota, Fernanda L.
Mak, Tze Minn
Octavia, Sophie
Pang, Junxiong
Tan, Iain Beehuat
Tan, Clive
Ong, Biauw Chi
Cook, Alex R.
Lee, Vernon J.
author_sort Pung, Rachael
collection PubMed
description Starting with a handful of SARS-CoV-2 infections in dormitory residents in late March 2020, rapid transmission in their dense living environments ensued and by October 2020, more than 50,000 acute infections were identified across various dormitories in Singapore. The aim of the study is to identify combination of factors facilitating SARS-CoV-2 transmission and the impact of control measures in a dormitory through extensive epidemiological, serological and phylogenetic investigations, supported by simulation models. Our findings showed that asymptomatic cases and symptomatic cases who did not seek medical attention were major drivers of the outbreak. Furthermore, each resident had about 30 close contacts and each infected resident spread to 4.4 (IQR 3.5–5.3) others at the start of the outbreak. The final attack rate of the current outbreak was 76.2% (IQR 70.6–98.0%) and could be reduced by further 10% under a modified dormitory housing condition. These findings are important when designing living environments in a post COVID-19 future to reduce disease spread and facilitate rapid implementation of outbreak control measures.
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spelling pubmed-83165722021-07-29 Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings Pung, Rachael Lin, Bernard Maurer-Stroh, Sebastian Sirota, Fernanda L. Mak, Tze Minn Octavia, Sophie Pang, Junxiong Tan, Iain Beehuat Tan, Clive Ong, Biauw Chi Cook, Alex R. Lee, Vernon J. Sci Rep Article Starting with a handful of SARS-CoV-2 infections in dormitory residents in late March 2020, rapid transmission in their dense living environments ensued and by October 2020, more than 50,000 acute infections were identified across various dormitories in Singapore. The aim of the study is to identify combination of factors facilitating SARS-CoV-2 transmission and the impact of control measures in a dormitory through extensive epidemiological, serological and phylogenetic investigations, supported by simulation models. Our findings showed that asymptomatic cases and symptomatic cases who did not seek medical attention were major drivers of the outbreak. Furthermore, each resident had about 30 close contacts and each infected resident spread to 4.4 (IQR 3.5–5.3) others at the start of the outbreak. The final attack rate of the current outbreak was 76.2% (IQR 70.6–98.0%) and could be reduced by further 10% under a modified dormitory housing condition. These findings are important when designing living environments in a post COVID-19 future to reduce disease spread and facilitate rapid implementation of outbreak control measures. Nature Publishing Group UK 2021-07-27 /pmc/articles/PMC8316572/ /pubmed/34315928 http://dx.doi.org/10.1038/s41598-021-94463-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Pung, Rachael
Lin, Bernard
Maurer-Stroh, Sebastian
Sirota, Fernanda L.
Mak, Tze Minn
Octavia, Sophie
Pang, Junxiong
Tan, Iain Beehuat
Tan, Clive
Ong, Biauw Chi
Cook, Alex R.
Lee, Vernon J.
Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings
title Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings
title_full Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings
title_fullStr Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings
title_full_unstemmed Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings
title_short Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings
title_sort factors influencing sars-cov-2 transmission and outbreak control measures in densely populated settings
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8316572/
https://www.ncbi.nlm.nih.gov/pubmed/34315928
http://dx.doi.org/10.1038/s41598-021-94463-3
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