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6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions

Background: Cervical cancer is the most common malignant tumor in the female reproductive system, while the efficacy of routine screening strategy is unsatisfied. New molecular tests need to be developed. miRNAs participate in many pathologic processes, and circulating miRNAs are promising non-invas...

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Autores principales: Ning, Ruoqi, Meng, Silu, Wang, Lin, Jia, Yao, Tang, Fangxu, Sun, Haiying, Zhang, Zhi, Zhang, Chong, Fan, Xinran, Xiao, Bing, Yang, Chunhua, Li, Shuang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8317520/
https://www.ncbi.nlm.nih.gov/pubmed/34335927
http://dx.doi.org/10.7150/jca.51141
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author Ning, Ruoqi
Meng, Silu
Wang, Lin
Jia, Yao
Tang, Fangxu
Sun, Haiying
Zhang, Zhi
Zhang, Chong
Fan, Xinran
Xiao, Bing
Yang, Chunhua
Li, Shuang
author_facet Ning, Ruoqi
Meng, Silu
Wang, Lin
Jia, Yao
Tang, Fangxu
Sun, Haiying
Zhang, Zhi
Zhang, Chong
Fan, Xinran
Xiao, Bing
Yang, Chunhua
Li, Shuang
author_sort Ning, Ruoqi
collection PubMed
description Background: Cervical cancer is the most common malignant tumor in the female reproductive system, while the efficacy of routine screening strategy is unsatisfied. New molecular tests need to be developed. miRNAs participate in many pathologic processes, and circulating miRNAs are promising non-invasive biomarkers in tumors. Objectives: This study aimed to identify the circulating miRNAs associated with both cervical cancer and cervical intraepithelial neoplasia (CIN), and establish a non-invasive classifier for cervical lesions using circulating miRNAs. Methods: This study consisted of 5 steps: miRNAs screening, miRNAs validation, classifier establishment, independent validation and in silico analyses. Three cohorts were included in our study: In screening stage, 24 samples including 14 cases and 10 controls were retrieved; In validation stage, 380 samples including 200 cases and 180 controls were recruited; In independent validation stage, 47 samples comprising 26 cases and 21 controls were included. miRNAs were quantified by RT-qPCR. A classifier was built with random forest algorithm using validation samples and selected miRNAs, which were then validated in an independent cohort. To explore the function of selected miRNAs, in silico analyses were performed. Target genes of selected miRNAs were predicted by the overlap of three online tools. Enrichment analyses were executed with predicted target genes. Differential analysis of target genes was carried out with open access expression assay datasets of cervical tissues. Results: 6 miRNAs (hsa-miR-26b-5p, hsa-miR-146b-5p, hsa-miR-191-5p, hsa-miR-484, hsa-miR-574-3p, hsa-miR-625-3p) were screened out from 754 miRNAs. They were associated with cervical lesions and were selected to establish a classifier. The accuracy of the classifier were 0.7218 (0.7117, 0.7319) in validation samples, which was 0.7021 in the independent cohort. 958 target genes were predicted and enriched in 23 pathways (MAPK, human papillomavirus infection and Wnt signaling pathway, etc.). 55 genes were identified as the most likely target genes by differential analysis. Conclusion: The 6 circulating miRNAs were related to cervical lesions and could serve as non-invasive biomarkers.
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spelling pubmed-83175202021-07-29 6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions Ning, Ruoqi Meng, Silu Wang, Lin Jia, Yao Tang, Fangxu Sun, Haiying Zhang, Zhi Zhang, Chong Fan, Xinran Xiao, Bing Yang, Chunhua Li, Shuang J Cancer Research Paper Background: Cervical cancer is the most common malignant tumor in the female reproductive system, while the efficacy of routine screening strategy is unsatisfied. New molecular tests need to be developed. miRNAs participate in many pathologic processes, and circulating miRNAs are promising non-invasive biomarkers in tumors. Objectives: This study aimed to identify the circulating miRNAs associated with both cervical cancer and cervical intraepithelial neoplasia (CIN), and establish a non-invasive classifier for cervical lesions using circulating miRNAs. Methods: This study consisted of 5 steps: miRNAs screening, miRNAs validation, classifier establishment, independent validation and in silico analyses. Three cohorts were included in our study: In screening stage, 24 samples including 14 cases and 10 controls were retrieved; In validation stage, 380 samples including 200 cases and 180 controls were recruited; In independent validation stage, 47 samples comprising 26 cases and 21 controls were included. miRNAs were quantified by RT-qPCR. A classifier was built with random forest algorithm using validation samples and selected miRNAs, which were then validated in an independent cohort. To explore the function of selected miRNAs, in silico analyses were performed. Target genes of selected miRNAs were predicted by the overlap of three online tools. Enrichment analyses were executed with predicted target genes. Differential analysis of target genes was carried out with open access expression assay datasets of cervical tissues. Results: 6 miRNAs (hsa-miR-26b-5p, hsa-miR-146b-5p, hsa-miR-191-5p, hsa-miR-484, hsa-miR-574-3p, hsa-miR-625-3p) were screened out from 754 miRNAs. They were associated with cervical lesions and were selected to establish a classifier. The accuracy of the classifier were 0.7218 (0.7117, 0.7319) in validation samples, which was 0.7021 in the independent cohort. 958 target genes were predicted and enriched in 23 pathways (MAPK, human papillomavirus infection and Wnt signaling pathway, etc.). 55 genes were identified as the most likely target genes by differential analysis. Conclusion: The 6 circulating miRNAs were related to cervical lesions and could serve as non-invasive biomarkers. Ivyspring International Publisher 2021-06-22 /pmc/articles/PMC8317520/ /pubmed/34335927 http://dx.doi.org/10.7150/jca.51141 Text en © The author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Ning, Ruoqi
Meng, Silu
Wang, Lin
Jia, Yao
Tang, Fangxu
Sun, Haiying
Zhang, Zhi
Zhang, Chong
Fan, Xinran
Xiao, Bing
Yang, Chunhua
Li, Shuang
6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions
title 6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions
title_full 6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions
title_fullStr 6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions
title_full_unstemmed 6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions
title_short 6 Circulating miRNAs can be used as Non-invasive Biomarkers for the Detection of Cervical Lesions
title_sort 6 circulating mirnas can be used as non-invasive biomarkers for the detection of cervical lesions
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8317520/
https://www.ncbi.nlm.nih.gov/pubmed/34335927
http://dx.doi.org/10.7150/jca.51141
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