The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae)

Rhamnus crenata Siebold & Zuccarini is deciduous shrub or small tree plant that widely distributed in temperate and tropical regions of East to Southeast Asia. It has a chloroplast genome structure similar to that of other species of Rhamnus. It is 160,454 bp in size, including a large single-co...

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Autores principales: Wang, Junfeng, Yang, Silin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8317963/
https://www.ncbi.nlm.nih.gov/pubmed/34368450
http://dx.doi.org/10.1080/23802359.2021.1945502
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author Wang, Junfeng
Yang, Silin
author_facet Wang, Junfeng
Yang, Silin
author_sort Wang, Junfeng
collection PubMed
description Rhamnus crenata Siebold & Zuccarini is deciduous shrub or small tree plant that widely distributed in temperate and tropical regions of East to Southeast Asia. It has a chloroplast genome structure similar to that of other species of Rhamnus. It is 160,454 bp in size, including a large single-copy (LSC) region of 88,884 bp, a small single-copy (SSC) region of 18,734 bp and a pair of inverted repeats (IRs) of 26,418 bp. A total of 122 genes were annotated, including 80 protein-coding genes, 38 transfer RNA (tRNA) genes, and 4 rRNA genes. The overall GC content is 30.71%. Phylogenetic analysis shows that R. crenata is clustered with R. taquetii and R. globosa.
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spelling pubmed-83179632021-08-06 The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae) Wang, Junfeng Yang, Silin Mitochondrial DNA B Resour Mitogenome Announcement Rhamnus crenata Siebold & Zuccarini is deciduous shrub or small tree plant that widely distributed in temperate and tropical regions of East to Southeast Asia. It has a chloroplast genome structure similar to that of other species of Rhamnus. It is 160,454 bp in size, including a large single-copy (LSC) region of 88,884 bp, a small single-copy (SSC) region of 18,734 bp and a pair of inverted repeats (IRs) of 26,418 bp. A total of 122 genes were annotated, including 80 protein-coding genes, 38 transfer RNA (tRNA) genes, and 4 rRNA genes. The overall GC content is 30.71%. Phylogenetic analysis shows that R. crenata is clustered with R. taquetii and R. globosa. Taylor & Francis 2021-07-26 /pmc/articles/PMC8317963/ /pubmed/34368450 http://dx.doi.org/10.1080/23802359.2021.1945502 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Junfeng
Yang, Silin
The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae)
title The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae)
title_full The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae)
title_fullStr The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae)
title_full_unstemmed The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae)
title_short The complete chloroplast genome of Rhamnus crenata Siebold & Zuccarini (Rhamnaceae)
title_sort complete chloroplast genome of rhamnus crenata siebold & zuccarini (rhamnaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8317963/
https://www.ncbi.nlm.nih.gov/pubmed/34368450
http://dx.doi.org/10.1080/23802359.2021.1945502
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