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Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins

Tailocins are bactericidal protein complexes produced by a wide variety of bacteria that kill closely related strains and may play a role in microbial community structure. Thanks to their high specificity, tailocins have been proposed as precision antibacterial agents for therapeutic applications. C...

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Autores principales: Carim, Sean, Azadeh, Ashley L., Kazakov, Alexey E., Price, Morgan N., Walian, Peter J., Lui, Lauren M., Nielsen, Torben N., Chakraborty, Romy, Deutschbauer, Adam M., Mutalik, Vivek K., Arkin, Adam P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319346/
https://www.ncbi.nlm.nih.gov/pubmed/33649553
http://dx.doi.org/10.1038/s41396-021-00921-1
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author Carim, Sean
Azadeh, Ashley L.
Kazakov, Alexey E.
Price, Morgan N.
Walian, Peter J.
Lui, Lauren M.
Nielsen, Torben N.
Chakraborty, Romy
Deutschbauer, Adam M.
Mutalik, Vivek K.
Arkin, Adam P.
author_facet Carim, Sean
Azadeh, Ashley L.
Kazakov, Alexey E.
Price, Morgan N.
Walian, Peter J.
Lui, Lauren M.
Nielsen, Torben N.
Chakraborty, Romy
Deutschbauer, Adam M.
Mutalik, Vivek K.
Arkin, Adam P.
author_sort Carim, Sean
collection PubMed
description Tailocins are bactericidal protein complexes produced by a wide variety of bacteria that kill closely related strains and may play a role in microbial community structure. Thanks to their high specificity, tailocins have been proposed as precision antibacterial agents for therapeutic applications. Compared to tailed phages, with whom they share an evolutionary and morphological relationship, bacterially produced tailocins kill their host upon production but producing strains display resistance to self-intoxication. Though lipopolysaccharide (LPS) has been shown to act as a receptor for tailocins, the breadth of factors involved in tailocin sensitivity, and the mechanisms behind resistance to self-intoxication, remain unclear. Here, we employed genome-wide screens in four non-model pseudomonads to identify mutants with altered fitness in the presence of tailocins produced by closely related pseudomonads. Our mutant screens identified O-antigen composition and display as most important in defining sensitivity to our tailocins. In addition, the screens suggest LPS thinning as a mechanism by which resistant strains can become more sensitive to tailocins. We validate many of these novel findings, and extend these observations of tailocin sensitivity to 130 genome-sequenced pseudomonads. This work offers insights into tailocin–bacteria interactions, informing the potential use of tailocins in microbiome manipulation and antibacterial therapy.
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spelling pubmed-83193462021-08-02 Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins Carim, Sean Azadeh, Ashley L. Kazakov, Alexey E. Price, Morgan N. Walian, Peter J. Lui, Lauren M. Nielsen, Torben N. Chakraborty, Romy Deutschbauer, Adam M. Mutalik, Vivek K. Arkin, Adam P. ISME J Article Tailocins are bactericidal protein complexes produced by a wide variety of bacteria that kill closely related strains and may play a role in microbial community structure. Thanks to their high specificity, tailocins have been proposed as precision antibacterial agents for therapeutic applications. Compared to tailed phages, with whom they share an evolutionary and morphological relationship, bacterially produced tailocins kill their host upon production but producing strains display resistance to self-intoxication. Though lipopolysaccharide (LPS) has been shown to act as a receptor for tailocins, the breadth of factors involved in tailocin sensitivity, and the mechanisms behind resistance to self-intoxication, remain unclear. Here, we employed genome-wide screens in four non-model pseudomonads to identify mutants with altered fitness in the presence of tailocins produced by closely related pseudomonads. Our mutant screens identified O-antigen composition and display as most important in defining sensitivity to our tailocins. In addition, the screens suggest LPS thinning as a mechanism by which resistant strains can become more sensitive to tailocins. We validate many of these novel findings, and extend these observations of tailocin sensitivity to 130 genome-sequenced pseudomonads. This work offers insights into tailocin–bacteria interactions, informing the potential use of tailocins in microbiome manipulation and antibacterial therapy. Nature Publishing Group UK 2021-03-01 2021-08 /pmc/articles/PMC8319346/ /pubmed/33649553 http://dx.doi.org/10.1038/s41396-021-00921-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Carim, Sean
Azadeh, Ashley L.
Kazakov, Alexey E.
Price, Morgan N.
Walian, Peter J.
Lui, Lauren M.
Nielsen, Torben N.
Chakraborty, Romy
Deutschbauer, Adam M.
Mutalik, Vivek K.
Arkin, Adam P.
Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
title Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
title_full Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
title_fullStr Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
title_full_unstemmed Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
title_short Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
title_sort systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319346/
https://www.ncbi.nlm.nih.gov/pubmed/33649553
http://dx.doi.org/10.1038/s41396-021-00921-1
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